RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 SPATA31C2B4DYI2 1134 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 RGS20O76081 388 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 HOXA10P31260 410 aaPredicted RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 INHBEP58166 350 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 LSM3P62310 102 aaKnown RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 MED22Q15528 200 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 TMPRSS11AQ6ZMR5 421 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 CHSY3Q70JA7 882 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 OR52K2Q8NGK3 314 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 ARL8BQ9NVJ2 186 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 COL1A2P08123 1366 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 DCCP43146 1447 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 MPZL2O60487 215 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 BANF1O75531 89 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 IPO13O94829 963 aaKnown RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 CTBP1Q13363 440 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 TPGS1Q6ZTW0 290 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 GJD3Q8N144 294 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 ADGRE2Q9UHX3 823 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 A0A1W2PQ67 120 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 HDCP19113 662 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 CRYBB1P53674 252 aaPredicted RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 SULT2A1Q06520 285 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 FAM13CQ8NE31 585 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 GSTCDQ8NEC7 633 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 TRPV3Q8NET8 790 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 TTLL2Q9BWV7 592 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 RHBGQ9H310 441 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 NXF3Q9H4D5 531 aaKnown RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 ASAH2Q9NR71 780 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 OGDHLQ9ULD0 1010 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 POLR3HQ9Y535 204 aaPredicted RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 A0A1W2PPM1 405 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 FAM86C2PA6NEL3 165 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 LYPLA1O75608 230 aaPredicted RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 CPTPQ5TA50 214 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 MON1AQ86VX9 555 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 TRPV1Q8NER1 839 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 NKD2Q969F2 451 aaPredicted RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 PDGFDQ9GZP0 370 aaPredicted RBP20.11■□□□□ 0.81
RNF40-203ENST00000493683 SLC27A6Q9Y2P4 619 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 DIP2CQ9Y2E4 1556 aa20.11■□□□□ 0.81
RNF40-203ENST00000493683 DDX3YO15523 660 aaKnown RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 UGT2B17O75795 530 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 RPP40O75818 363 aaKnown RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 MC4RP32245 332 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 BNIP1Q12981 228 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 SLCO6A1Q86UG4 719 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 DSELQ8IZU8 1212 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 BTBD9Q96Q07 612 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 TBC1D3BA6NDS4 549 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 LOC110117498-PIK3R3F6TDL0 507 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 H3BNH8 94 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 STX16-NPEPL1H3BU86 382 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 STX16O14662 325 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 GNPDA1P46926 289 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 NOMO2Q5JPE7 1267 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 OXCT2Q9BYC2 517 aaPredicted RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 ACP6Q9NPH0 428 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 A8MX80 341 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 SMIM10L2AP0DMW4 78 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 SMIM10L2BP0DMW5 78 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 PARP15Q460N3 678 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 BEND7Q8N7W2 519 aaPredicted RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 GRIN3AQ8TCU5 1115 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 C1QTNF1Q9BXJ1 281 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 SLC17A7Q9P2U7 560 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 STOML2Q9UJZ1 356 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 MRTO4Q9UKD2 239 aaKnown RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 MRPS33Q9Y291 106 aaKnown RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 GPIP06744 558 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 SLC35G4P0C7Q5 338 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 TRMT13Q9NUP7 481 aaKnown RBP20.1■□□□□ 0.81
RNF40-203ENST00000493683 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
RNF40-203ENST00000493683 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 AMD1P17707 334 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 SDC2P34741 201 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 ENPEPQ07075 957 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 PUDPQ08623 228 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 TRIM32Q13049 653 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 CPSF6Q16630 551 aaKnown RBP eCLIP20.09■□□□□ 0.81
RNF40-203ENST00000493683 TIGD2Q4W5G0 525 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 MTX3Q5HYI7 312 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 FNBP1LQ5T0N5 605 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 DET1Q7L5Y6 550 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 FAM35AQ86V20 835 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 DENND1CQ8IV53 801 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 KCTD5Q9NXV2 234 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 EURLQ9NYK6 297 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 LGALS13Q9UHV8 139 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 DEPDC5O75140 1603 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 RGS10O43665 173 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 SLC28A2O43868 658 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 TULP3O75386 442 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 MMP8P22894 467 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 ACADLP28330 430 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 CDC25CP30307 473 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 ALG3Q92685 438 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 CDH22Q9UJ99 828 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms