RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 RGS13O14921 159 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 AP2A1O95782 977 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 SPNP16150 400 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 ATP5F1P24539 256 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 CD40LGP29965 261 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 GSK3BP49841 420 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 PHC1P78364 1004 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 ILF2Q12905 390 aaKnown RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 CCDC58Q4VC31 144 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 C6orf141Q5SZD1 244 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 EEF1DP3Q658K8 133 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 ANKRD34AQ69YU3 496 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 HEATR4Q86WZ0 1026 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 C8orf59Q8N0T1 100 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 POC5Q8NA72 575 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 BTN2A3PQ96KV6 586 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 NTN4Q9HB63 628 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 MOV10Q9HCE1 1003 aaKnown RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 HACD3Q9P035 362 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 C16orf96A6NNT2 1141 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 HOXC11O43248 304 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 B4GALT4O60513 344 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TGFBR1P36897 503 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 ALDH7A1P49419 539 aaKnown RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 IST1P53990 364 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TAS2R39P59534 338 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 NCS1P62166 190 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 GHRHRQ02643 423 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 SURF1Q15526 300 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 CTU2Q2VPK5 515 aaKnown RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 MINDY1Q8N5J2 469 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 PNPLA1Q8N8W4 532 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TP53INP1Q96A56 240 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 BIRC7Q96CA5 298 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TMEM74Q96NL1 305 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 CDK5RAP1Q96SZ6 601 aaKnown RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 EMILIN2Q9BXX0 1053 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 TOR3AQ9H497 397 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 ALG2Q9H553 416 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 SLC38A10Q9HBR0 1119 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 C8orf4Q9NR00 106 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 FBXO8Q9NRD0 319 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 PNMA8BQ9ULN7 279 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-210ENST00000493582 NDUFAF1Q9Y375 327 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
HDAC4-210ENST00000493582 FAM95CA0A1B0GW59 222 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 TAF4O00268 1085 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 ZBTB24O43167 697 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 TBX1O43435 398 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 MGEA5O60502 916 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 SEC24AO95486 1093 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 PRKCBP05771 671 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 THRBP10828 461 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 GLUD2P49448 558 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 RACK1P63244 317 aaKnown RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 SNX17Q15036 470 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 DGUOKQ16854 277 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 SOWAHAQ2M3V2 549 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 RBM48Q5RL73 367 aaKnown RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 RSBN1Q5VWQ0 802 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 LRRC49Q8IUZ0 686 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 CHDHQ8NE62 594 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 MRPL57Q9BQC6 102 aaKnown RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 BDH2Q9BUT1 245 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 SMURF2Q9HAU4 748 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 CPNE5Q9HCH3 593 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 CASS4Q9NQ75 786 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 PAK1IP1Q9NWT1 392 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 ZNF639Q9UID6 485 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 DSEQ9UL01 958 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 TESMINQ9Y4I5 508 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 CTDP1Q9Y5B0 961 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 SNX5Q9Y5X3 404 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 BTAF1O14981 1849 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 A8MT66 165 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 ZNF487B1APH4 448 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 H3BMM5 538 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 DYRK3O43781 588 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 NOBOXO60393 691 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 PIGAP37287 484 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 HADHAP40939 763 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 BCAT1P54687 386 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 CCNA1P78396 465 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 LIPEQ05469 1076 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 ACOT1Q86TX2 421 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 AFAP1L2Q8N4X5 818 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 ELMO2Q96JJ3 720 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 NODALQ96S42 347 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 KCTD14Q9BQ13 255 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 EML4Q9HC35 981 aaKnown RBP11.69□□□□□ -0.54
HDAC4-210ENST00000493582 SLAMF8Q9P0V8 285 aa11.69□□□□□ -0.54
HDAC4-210ENST00000493582 MAGEB16A2A368 324 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms