RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 OR4D1Q15615 310 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 OGFRL1Q5TC84 451 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 PQLC1Q8N2U9 271 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 RYBPQ8N488 228 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 RNF148Q8N7C7 305 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 PDZD8Q8NEN9 1154 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 OVCA2Q8WZ82 227 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 MTRRQ9UBK8 725 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 BCAP29Q9UHQ4 241 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 MED16Q9Y2X0 877 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 ARIH1Q9Y4X5 557 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 ILVBLA1L0T0 632 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 PSMD12O00232 456 aaPredicted RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 ACOT8O14734 319 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 EFEMP2O95967 443 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 LYNP07948 512 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 PSMA3P25788 255 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 OR1D2P34982 312 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 PSMD8P48556 350 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 AQP4P55087 323 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 CDH13P55290 713 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 SH3BP2P78314 561 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 LRP8Q14114 963 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 FASTKQ14296 549 aaKnown RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 MAPRE2Q15555 327 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 HECTD3Q5T447 861 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 FAM219BQ5XKK7 198 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 MDGA1Q8NFP4 955 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 EXOC2Q96KP1 924 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 ATOH8Q96SQ7 321 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 TFB2MQ9H5Q4 396 aaKnown RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 CCDC167Q9P0B6 97 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 PCDHGA7Q9Y5G6 932 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 GPC4O75487 556 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 BCAS2O75934 225 aaPredicted RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 FGF4P08620 206 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 RPL17P18621 184 aaKnown RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 SGSHP51688 502 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 PDAP1Q13442 181 aaKnown RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 TAF1AQ15573 450 aaPredicted RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 EML3Q32P44 896 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 SETMARQ53H47 684 aaPredicted RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 ZFP1Q6P2D0 407 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 CLYBLQ8N0X4 340 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 PTGR2Q8N8N7 351 aaPredicted RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 OR4K2Q8NGD2 314 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 RMDN1Q96DB5 314 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 ASB2Q96Q27 587 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 TDRD1Q9BXT4 1180 aaKnown RBP18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 CACNA2D2Q9NY47 1150 aa18.85■□□□□ 0.61
TSC22D4-205ENST00000493217 UBXN8O00124 270 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 FBP2O00757 339 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 STC2O76061 302 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 CDK14O94921 469 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 SIX3O95343 332 aaPredicted RBP18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 UBTFL6P0CB48 400 aaPredicted RBP18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 UQCRBP14927 111 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 HMGA1P17096 107 aaKnown RBP18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 MRPS22P82650 360 aaKnown RBP18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 CYTH1Q15438 398 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 AGKQ53H12 422 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 GLT6D1Q7Z4J2 308 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 BHLHE22Q8NFJ8 381 aaPredicted RBP18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 LPGAT1Q92604 370 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 EXT2Q93063 718 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 PLD4Q96BZ4 506 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 C19orf60Q96EN9 201 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 C3orf30Q96M34 536 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 PPP1R12CQ9BZL4 782 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 GKN1Q9NS71 199 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 SARDHQ9UL12 918 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 DNAJC15Q9Y5T4 150 aa18.84■□□□□ 0.61
TSC22D4-205ENST00000493217 ATP6AP2A0A1C7CYW4 349 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 PPP6CO00743 305 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 ATP6AP2O75787 350 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 F11P03951 625 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 CORO1AP31146 461 aaKnown RBP18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 ALDH1A3P47895 512 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 PSME3P61289 254 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 PFKFB4Q16877 469 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 AFTPHQ6ULP2 937 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 DLG3Q92796 817 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 CWH43Q9H720 699 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 SYTL2Q9HCH5 934 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 TBC1D30Q9Y2I9 924 aa18.83■□□□□ 0.61
TSC22D4-205ENST00000493217 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 UBA6A0AVT1 1052 aaPredicted RBP18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 RNASEH1O60930 286 aaKnown RBP18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 RHOCP08134 193 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 ZNF177Q13360 481 aaPredicted RBP18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 USP41Q3LFD5 358 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 MMEL1Q495T6 779 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 REP15Q6BDI9 236 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 PAQR3Q6TCH7 311 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 FAM43BQ6ZT52 329 aaPredicted RBP18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 CHST9Q7L1S5 443 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 TMEM126BQ8IUX1 230 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 LRRC43Q8N309 656 aa18.83■□□□□ 0.6
TSC22D4-205ENST00000493217 KIAA1191Q96A73 305 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms