RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 CSH1P0DML2 217 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 CSH2P0DML3 217 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 KRT10P13645 584 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 ABCD3P28288 659 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 MSH2P43246 934 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 RBM5P52756 815 aaKnown RBP eCLIP3.39□□□□□ -1.87
VPS36-205ENST00000492650 ADORA2A-AS1P86434 159 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 DLG1Q12959 904 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 MAMLD1Q13495 774 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 BYSLQ13895 437 aaKnown RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 CAPSQ13938 189 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 ATG16L1Q676U5 607 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 IL27RAQ6UWB1 636 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 OR8H3Q8N146 312 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 TMEM57Q8N5G2 664 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 LMNTD1Q8N9Z9 388 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 ZNF114Q8NC26 417 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 MTBPQ96DY7 904 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 CALML4Q96GE6 196 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 REEP2Q9BRK0 252 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 MSTO1Q9BUK6 570 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 ITPAQ9BY32 194 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 SPRY4Q9C004 299 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 C2orf40Q9H1Z8 148 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 MVB12BQ9H7P6 319 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 PLEKHA2Q9HB19 425 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 NOD2Q9HC29 1040 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 WDR6Q9NNW5 1121 aaKnown RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 XPO7Q9UIA9 1087 aaKnown RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 RASAL2Q9UJF2 1139 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 NAP1L2Q9ULW6 460 aaPredicted RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 PCDHGB5Q9Y5G0 923 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 PCDHAC2Q9Y5I4 1007 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 ZFP37Q9Y6Q3 630 aaPredicted RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 FLT1P17948 1338 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 FAM90A20PA6NIJ5 464 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 AGAP14A8MT82 685 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PRAC2D3DTV9 90 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 E7EVH7 732 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 H0Y3Z8 333 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 UBE2CO00762 179 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 TIMM23O14925 209 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 SEPT4O43236 478 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 GJB3O75712 270 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 BEST1O76090 585 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 GOSR1O95249 250 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 VNN2O95498 520 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 MT-ND3P03897 115 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 QDPRP09417 244 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 HSPA1AP0DMV8 641 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 HSPA1BP0DMV9 641 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 LAMP2P13473 410 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 AMD1P17707 334 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PSMA4P25789 261 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 DCTDP32321 178 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 HPDP32754 393 aaPredicted RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 ACSL1P33121 698 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 ARL3P36405 182 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 NNMTP40261 264 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PNPLA4P41247 253 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 TDO2P48775 406 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 NLRP5P59047 1200 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 ARHGAP8P85298 464 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 MC1RQ01726 317 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PPARDQ03181 441 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 UBXN1Q04323 297 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 GALNT2Q10471 571 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 EPS8Q12929 822 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 DHX34Q14147 1143 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 IL13RA2Q14627 380 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 ANKRD1Q15327 319 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 MRGPRG-AS1Q2M3A8 158 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 DUSP28Q4G0W2 176 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 DCAF6Q58WW2 860 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 ODF2Q5BJF6 829 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 C1orf141Q5JVX7 400 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 STPG1Q5TH74 334 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 GPR139Q6DWJ6 353 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 MEX3BQ6ZN04 569 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 RAPH1Q70E73 1250 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 ZNF771Q7L3S4 317 aaPredicted RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 CCDC91Q7Z6B0 441 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PXKQ7Z7A4 578 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 CPLX4Q7Z7G2 160 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 ADSSL1Q8N142 457 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 KCTD6Q8NC69 237 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 LSM14AQ8ND56 463 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 CSGALNACT1Q8TDX6 532 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 NCSTNQ92542 709 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 CD101Q93033 1021 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 CENPTQ96BT3 561 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 FAM120BQ96EK7 910 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 IWS1Q96ST2 819 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PI4K2AQ9BTU6 479 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 PDCL3Q9H2J4 239 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 SEPT11Q9NVA2 429 aaKnown RBP3.38□□□□□ -1.87
VPS36-205ENST00000492650 NLKQ9UBE8 527 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 FBXO40Q9UH90 709 aa3.38□□□□□ -1.87
VPS36-205ENST00000492650 GTF3C4Q9UKN8 822 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms