RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TC2NQ8N9U0 490 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 EXD1Q8NHP7 514 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 KCNE4Q8WWG9 221 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 CCDC74AQ96AQ1 378 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 FAF2Q96CS3 445 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 PDXPQ96GD0 296 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 PACSIN1Q9BY11 444 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 TEX101Q9BY14 249 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 DPH1Q9BZG8 443 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 PCDH9Q9HC56 1237 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 FGF22Q9HCT0 170 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 RAD18Q9NS91 495 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 PKD2L2Q9NZM6 624 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 LRIT1Q9P2V4 623 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 PCDHGA8Q9Y5G5 932 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 TP53BP1Q12888 1972 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 GOLGA4Q13439 2230 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 A0A0J9YYE9 177 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 RGSL1A5PLK6 1076 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 NPIPB15A6NHN6 443 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 B4DGG1 531 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 MTSS1O43312 755 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 NUDT21O43809 227 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 JCHAINP01591 159 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 TRBC1P01850 177 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 RPLP0P05388 317 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 GNPDA1P46926 289 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 PPM1FP49593 454 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 ZNF75DP51815 510 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 CDK3Q00526 305 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 C14orf28Q4W4Y0 310 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 PERM1Q5SV97 790 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 LRRC66Q68CR7 880 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 HSD11B1LQ7Z5J1 315 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 TMTC1Q8IUR5 882 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 CCNJLQ8IV13 435 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 KYQ8NBH2 561 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 LPCAT1Q8NF37 534 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 PIH1D2Q8WWB5 315 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 ATXN7L3BQ96GX2 97 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 MLPHQ9BV36 600 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 TDRD1Q9BXT4 1180 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 TMEM168Q9H0V1 697 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 STN1Q9H668 368 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 SUDS3Q9H7L9 328 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 SPTLC3Q9NUV7 552 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 APPL1Q9UKG1 709 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 CHKBQ9Y259 395 aa16.53■□□□□ 0.24
PDLIM2-217ENST00000491330 KNTC1P50748 2209 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 A0A0A6YYK5 440 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 CAPN8A6NHC0 703 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 ASMTLO95671 621 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 JMJD7P0C870 316 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 TNNT1P13805 278 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 NR2C2P49116 596 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 INHBCP55103 352 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 TAS2R40P59535 323 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 DSC2Q02487 901 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 LRP8Q14114 963 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 CLPPQ16740 277 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 ALG1LQ6GMV1 187 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 OGFOD3Q6PK18 319 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 IGF2-ASQ6U949 168 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 ADAMTSL4Q6UY14 1074 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 TXLNBQ8N3L3 684 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 Q8N9G6 341 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 GPR156Q8NFN8 814 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 HIC2Q96JB3 615 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 LGR4Q9BXB1 951 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 RBSNQ9H1K0 784 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 LRRN3Q9H3W5 708 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 EPB41L5Q9HCM4 733 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 MRPL40Q9NQ50 206 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 DTLQ9NZJ0 730 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 SEPT10Q9P0V9 454 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 IMPACTQ9P2X3 320 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 SATB2Q9UPW6 733 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 ENTPD2Q9Y5L3 495 aa16.52■□□□□ 0.24
PDLIM2-217ENST00000491330 PTPRBP23467 1997 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 C1orf232A0A0U1RR37 186 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 IVLP07476 585 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 CELA2BP08218 269 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC2A4P14672 509 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 FECHP22830 423 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 LHCGRP22888 699 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 CETN2P41208 172 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 MAGEA1P43355 309 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 TMPRSS3P57727 454 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 GBE1Q04446 702 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 PPIDQ08752 370 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 CERCAMQ5T4B2 595 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 TMEM164Q5U3C3 297 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 DOK6Q6PKX4 331 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 RAB11FIP2Q7L804 512 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 GPR155Q7Z3F1 870 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 NT5DC3Q86UY8 548 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms