RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 POLR2LP62875 67 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 CDK3Q00526 305 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 PEX6Q13608 980 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 TCTN3Q6NUS6 607 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 KDELC2Q7Z4H8 507 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 ARHGAP22Q7Z5H3 698 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 ZNF761Q86XN6 746 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 PAF1Q8N7H5 531 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 TEX19Q8NA77 164 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 SLC30A5Q8TAD4 765 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 NSMCE3Q96MG7 304 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 ZPBPQ9BS86 351 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 TRIT1Q9H3H1 467 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 NDST4Q9H3R1 872 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 APMAPQ9HDC9 416 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 B4GALT6Q9UBX8 382 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 NOCTQ9UK39 431 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 SLC17A4Q9Y2C5 497 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 PLEKHM1Q9Y4G2 1056 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 KCTD3Q9Y597 815 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 MRPS18BQ9Y676 258 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 KCNMB2Q9Y691 235 aa13.61□□□□□ -0.23
CTDSP1-210ENST00000491064 CSMD1Q96PZ7 3565 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 HIVEP3Q5T1R4 2406 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 ENO4A6NNW6 628 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 A8MU76 341 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 F8VZ95 297 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 FGF10O15520 208 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 PALMO75781 387 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 DLGAP3O95886 979 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 IVLP07476 585 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 KRT3P12035 628 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 UCHL3P15374 230 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 GPD1P21695 349 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 ERCC5P28715 1186 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 MAN1A1P33908 653 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 ACTR1BP42025 376 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 FASLGP48023 281 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 POLD2P49005 469 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 ACTR1AP61163 376 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 FMO1Q01740 532 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 CNGA3Q16281 694 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 SNAP47Q5SQN1 464 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 WDR59Q6PJI9 974 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 ZNF677Q86XU0 584 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 DTD2Q96FN9 168 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 AHCYL2Q96HN2 611 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 CELF6Q96J87 481 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 STK33Q9BYT3 514 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 FBXO8Q9NRD0 319 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 KCTD5Q9NXV2 234 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 DACH1Q9UI36 760 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 SHANK1Q9Y566 2161 aa13.6□□□□□ -0.23
CTDSP1-210ENST00000491064 MKRN2OSH3BPM6 223 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CCP110O43303 1012 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CHRNB2P17787 502 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 F8A1P23610 371 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 ETV3P41162 512 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 STAT5AP42229 794 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 PAPOLAP51003 745 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 NDST2P52849 883 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 GSCP56915 257 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 NSUN2Q08J23 767 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 FHL5Q5TD97 284 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CRYBG3Q68DQ2 2970 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 WDR74Q6RFH5 385 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CCDC13Q8IYE1 715 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CBARPQ8N350 705 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 OR10G6Q8NH81 332 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 SLC37A2Q8TED4 501 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 SCARF2Q96GP6 870 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 SLC38A3Q99624 504 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 CINPQ9BW66 212 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 SLC39A8Q9C0K1 460 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 PRDM8Q9NQV8 689 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 MED13Q9UHV7 2174 aa13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 PRRC2CQ9Y520 2896 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-210ENST00000491064 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 TRBV23OR9-2A0A075B6M9 112 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 ARHGAP42A6NI28 874 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 VPS4BO75351 444 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 HEXIM1O94992 359 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 GNLYP22749 145 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 TEAD1P28347 426 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 PPM1FP49593 454 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 SCNN1BP51168 640 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 AIF1P55008 147 aa13.58□□□□□ -0.24
CTDSP1-210ENST00000491064 TPI1P60174 286 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms