RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	TREML1	Q86YW5	311 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	DSEL	Q8IZU8	1212 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	CENPL	Q8N0S6	344 aa	Predicted RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	PACRGL	Q8N7B6	248 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	KIAA1958	Q8N8K9	716 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	KDM1B	Q8NB78	822 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	ARRDC2	Q8TBH0	407 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	USP33	Q8TEY7	942 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	DDI1	Q8WTU0	396 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	HEXDC	Q8WVB3	486 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	KCTD4	Q8WVF5	259 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	KCNJ9	Q92806	393 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	HDAC10	Q969S8	669 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	KIAA1191	Q96A73	305 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	ZUFSP	Q96AP4	578 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	LENG1	Q96BZ8	264 aa	Predicted RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	NXNL1	Q96CM4	212 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	HMCES	Q96FZ2	354 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	DUS3L	Q96G46	650 aa	Known RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	ZNF512	Q96ME7	567 aa	Predicted RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	GPR78	Q96P69	363 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	LENG8	Q96PV6	779 aa	Predicted RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	SH3GL1	Q99961	368 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	SEMA3C	Q99985	751 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	ECSIT	Q9BQ95	431 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	EBF4	Q9BQW3	602 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	C2orf49	Q9BVC5	232 aa	Predicted RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	C20orf27	Q9GZN8	174 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	C12orf65	Q9H3J6	166 aa	Known RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	POMK	Q9H5K3	350 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	MAGEE1	Q9HCI5	957 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	SPAG4	Q9NPE6	437 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	ANLN	Q9NQW6	1124 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	RAD18	Q9NS91	495 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	NMRK1	Q9NWW6	199 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	PLK2	Q9NYY3	685 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	UBP1	Q9NZI7	540 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	GMIP	Q9P107	970 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	CPSF2	Q9P2I0	782 aa	Known RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	MTRR	Q9UBK8	725 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	SUCO	Q9UBS9	1254 aa	Known RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	SARDH	Q9UL12	918 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	MAPRE3	Q9UPY8	281 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	POMP	Q9Y244	141 aa		6.34	□□□□□ -1.39
FN1-223	ENST00000490833	MTF2	Q9Y483	593 aa	Predicted RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	6.34	□□□□□ -1.39
FN1-223	ENST00000490833	LOC100653049	A0A140TA62	436 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	SMIM31	A0A1B0GVY4	71 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833		A0A1W2PQ45	241 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833		A0A1W2PQY0	241 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	PABPN1L	A6NDY0	278 aa	Known RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	AQP12B	A6NM10	295 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	SLC38A8	A6NNN8	435 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	ENO4	A6NNW6	628 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833		E9PBE3	544 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833		H0Y3Z8	333 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833		I6L893	689 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	QSOX1	O00391	747 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	STX7	O15400	261 aa	Known RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	DENR	O43583	198 aa	Known RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	LDB2	O43679	373 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	AP1G1	O43747	822 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	NRP2	O60462	931 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	MAN1A2	O60476	641 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	KLHL41	O60662	606 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	SNX2	O60749	519 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	LYPLA1	O75608	230 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	KRT34	O76011	436 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	UPP2	O95045	317 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	ZIC2	O95409	532 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	PRKCG	P05129	697 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	GALT	P07902	379 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	RHOC	P08134	193 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	UROS	P10746	265 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	PIM1	P11309	404 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	UQCRB	P14927	111 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	ZNF7	P17097	686 aa	Predicted RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	GM2A	P17900	193 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	LBP	P18428	481 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	IL10	P22301	178 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	FDXR	P22570	491 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	PPM1A	P35813	382 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	NUDT2	P50583	147 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	CCR3	P51677	355 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	POLR2L	P62875	67 aa	Known RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	ZNF33B	Q06732	778 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	SLC10A7	Q0GE19	358 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	LCP2	Q13094	533 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	UBAP2L	Q14157	1087 aa	Known RBP	6.33	□□□□□ -1.4
FN1-223	ENST00000490833	IKBKE	Q14164	716 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	PTK2B	Q14289	1009 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	CSHL1	Q14406	222 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	INPP5A	Q14642	412 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	PCSK7	Q16549	785 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	DDR2	Q16832	855 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	TTLL9	Q3SXZ7	439 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	GPR33	Q49SQ1	333 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	ACCSL	Q4AC99	568 aa		6.33	□□□□□ -1.4
FN1-223	ENST00000490833	HSF5	Q4G112	596 aa	Predicted RBP	6.33	□□□□□ -1.4

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