RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 C8orf86Q6ZUL3 223 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 B4GALNT4Q76KP1 1039 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 DCP2Q8IU60 420 aaKnown RBP7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 HID1Q8IV36 788 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 PHACTR4Q8IZ21 702 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 CCL4L1Q8NHW4 92 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 SYN2Q92777 582 aaPredicted RBP7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 ECHDC3Q96DC8 303 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 KRTAP4-12Q9BQ66 201 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 LRRC61Q9BV99 259 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 CINPQ9BW66 212 aaPredicted RBP7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 LGR4Q9BXB1 951 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 NOD2Q9HC29 1040 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 MRPL47Q9HD33 250 aaKnown RBP7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 ZNF358Q9NW07 568 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 ANAPC7Q9UJX3 599 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 ATP8A1Q9Y2Q0 1164 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 OR1A2Q9Y585 309 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 SCINQ9Y6U3 715 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 HECTD1Q9ULT8 2610 aa7.35□□□□□ -1.23
PRPF4B-208ENST00000490653 PTPRQQ9UMZ3 2332 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 TMEM202A6NGA9 273 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 H3BRJ5 948 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PYCARD-AS1I3L0S3 204 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 RECQL5O94762 991 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PDHA1P08559 390 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 MYBL1P10243 752 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 CTPS1P17812 591 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 HTR7P34969 479 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 MMP12P39900 470 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 ADH7P40394 386 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 ARL4AP40617 200 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 EIF2S3P41091 472 aaKnown RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 HNRNPKP61978 463 aaKnown RBP eCLIP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 BCL2L1Q07817 233 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 NSUN2Q08J23 767 aaKnown RBP eCLIP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 DPYSL3Q14195 570 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PIGHQ14442 188 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 LRRC14Q15048 493 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 ALG11Q2TAA5 492 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 DENND2CQ68D51 928 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 C20orf204Q6ZNR8 217 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 EFL1Q7Z2Z2 1120 aaKnown RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 TSPAN33Q86UF1 283 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PARGQ86W56 976 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PSTKQ8IV42 348 aaKnown RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 SLC35F3Q8IY50 421 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 CBARPQ8N350 705 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PQLC3Q8N755 202 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 NIPA2Q8N8Q9 360 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 DENND6BQ8NEG7 585 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 ZNF564Q8TBZ8 553 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 FAM71BQ8TC56 605 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 IFI44Q8TCB0 444 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 HCAR2Q8TDS4 363 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 RFFLQ8WZ73 363 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 OR1E3Q8WZA6 343 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 RAPGEF5Q92565 580 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 IFT43Q96FT9 208 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 ZNF641Q96N77 438 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 PSKH2Q96QS6 385 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 SEMA4CQ9C0C4 833 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 NT5MQ9NPB1 228 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 NLGN3Q9NZ94 848 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 SIRPGQ9P1W8 387 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 GULP1Q9UBP9 304 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 B4GALT6Q9UBX8 382 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 IP6K2Q9UHH9 426 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 CLCA2Q9UQC9 943 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 BZW2Q9Y6E2 419 aaKnown RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 AK5Q9Y6K8 562 aa7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 COL27A1Q8IZC6 1860 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-208ENST00000490653 EME2A4GXA9 379 aaPredicted RBP7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 NEMP2A6NFY4 417 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 EIF3CLB5ME19 914 aaKnown RBP7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 MYO1FO00160 1098 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 AGRPO00253 132 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 HTRA2O43464 458 aaPredicted RBP7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 MFSD11O43934 449 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 BRINP1O60477 761 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 MPOP05164 745 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 ALPIP09923 528 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 H2AFB2P0C5Z0 115 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 KRT10P13645 584 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 DESP17661 470 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 LHCGRP22888 699 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 HNRNPH3P31942 346 aaKnown RBP7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 POLD2P49005 469 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 THOP1P52888 689 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 SRP54P61011 504 aaKnown RBP7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 YPEL5P62699 121 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 TPM4P67936 248 aa7.33□□□□□ -1.24
PRPF4B-208ENST00000490653 E2F1Q01094 437 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms