RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 C11orf63Q6NUN7 778 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 MFSD7Q6UXD7 560 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 NPNTQ6UXI9 565 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 RBM44Q6ZP01 1051 aaKnown RBP17.42■□□□□ 0.38
SEC13-218ENST00000490283 ZNF765Q7L2R6 523 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 CCDC50Q8IVM0 306 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 CBARPQ8N350 705 aaPredicted RBP17.42■□□□□ 0.38
SEC13-218ENST00000490283 KYQ8NBH2 561 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 CCHCR1Q8TD31 782 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 RBM41Q96IZ5 413 aaKnown RBP17.42■□□□□ 0.38
SEC13-218ENST00000490283 TEX101Q9BY14 249 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 CARS2Q9HA77 564 aaKnown RBP17.42■□□□□ 0.38
SEC13-218ENST00000490283 MRPL40Q9NQ50 206 aaKnown RBP17.42■□□□□ 0.38
SEC13-218ENST00000490283 SHROOM3Q8TF72 1996 aa17.42■□□□□ 0.38
SEC13-218ENST00000490283 TCEA3O75764 348 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 ZRANB2O95218 330 aaKnown RBP eCLIP17.41■□□□□ 0.38
SEC13-218ENST00000490283 TGM2P21980 687 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 NAP1L1P55209 391 aaKnown RBP17.41■□□□□ 0.38
SEC13-218ENST00000490283 ILF3Q12906 894 aaKnown RBP eCLIP17.41■□□□□ 0.38
SEC13-218ENST00000490283 PEX6Q13608 980 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 PTPRRQ15256 657 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 CCDC70Q6NSX1 233 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 SPOCD1Q6ZMY3 1216 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 TECPR1Q7Z6L1 1165 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 DAAM2Q86T65 1068 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 NT5DC3Q86UY8 548 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 RAVER1Q8IY67 606 aaKnown RBP17.41■□□□□ 0.38
SEC13-218ENST00000490283 NRSN1Q8IZ57 195 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 FAM46DQ8NEK8 389 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 KIAA1524Q8TCG1 905 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 GRAMD1AQ96CP6 724 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 OLFM3Q96PB7 478 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 CCDC3Q9BQI4 270 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 MLPHQ9BV36 600 aaPredicted RBP17.41■□□□□ 0.38
SEC13-218ENST00000490283 GSDMCQ9BYG8 508 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 TMEM168Q9H0V1 697 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 DPEP2Q9H4A9 486 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 SUDS3Q9H7L9 328 aaPredicted RBP17.41■□□□□ 0.38
SEC13-218ENST00000490283 CD84Q9UIB8 345 aa17.41■□□□□ 0.38
SEC13-218ENST00000490283 EPN1Q9Y6I3 576 aaPredicted RBP17.41■□□□□ 0.38
SEC13-218ENST00000490283 KNTC1P50748 2209 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 LRRK1Q38SD2 2015 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 C1orf232A0A0U1RR37 186 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 MTSS1O43312 755 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 CST8O60676 142 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 USP12O75317 370 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 NDUFA10O95299 355 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 ACTN2P35609 894 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 CDKN2BP42772 138 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 TNNT3P45378 269 aaPredicted RBP17.4■□□□□ 0.38
SEC13-218ENST00000490283 STC1P52823 247 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 SKOR1P84550 965 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 PTSQ03393 145 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 SPIDRQ14159 915 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 PERM1Q5SV97 790 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 ADAMTSL4Q6UY14 1074 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 KATNAL2Q8IYT4 538 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 RCOR2Q8IZ40 523 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 PELI3Q8N2H9 469 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 TFB1MQ8WVM0 346 aaKnown RBP17.4■□□□□ 0.38
SEC13-218ENST00000490283 P3H4Q92791 437 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 LYSMD1Q96S90 227 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 CEP41Q9BYV8 373 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 ABCG8Q9H221 673 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 PKD2L2Q9NZM6 624 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 PCDHB1Q9Y5F3 818 aa17.4■□□□□ 0.38
SEC13-218ENST00000490283 SOWAHDA6NJG2 315 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 B4DGG1 531 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 ANKRD66B4E2M5 251 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 RRP8O43159 456 aaKnown RBP17.39■□□□□ 0.37
SEC13-218ENST00000490283 BRINP1O60477 761 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 CLDN7O95471 211 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 PRLP01236 227 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 GNPDA1P46926 289 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 BIRC2Q13490 618 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 QPCTQ16769 361 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 ISXQ2M1V0 245 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 CCDC181Q5TID7 509 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 KCTD16Q68DU8 428 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 DOK6Q6PKX4 331 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 LRRC69Q6ZNQ3 347 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 NYAP1Q6ZVC0 841 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 NLRP8Q86W28 1048 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 LSMEM2Q8N112 164 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 TXLNBQ8N3L3 684 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 CNTD1Q8N815 330 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 CCDC74AQ96AQ1 378 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 IMP4Q96G21 291 aaKnown RBP17.39■□□□□ 0.37
SEC13-218ENST00000490283 DCBLD2Q96PD2 775 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 FRMD8Q9BZ67 464 aaPredicted RBP17.39■□□□□ 0.37
SEC13-218ENST00000490283 CDH19Q9H159 772 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 SLC25A51Q9H1U9 297 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 GOLPH3Q9H4A6 298 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 TRNAU1APQ9NX07 287 aaKnown RBP17.39■□□□□ 0.37
SEC13-218ENST00000490283 LHX6Q9UPM6 363 aa17.39■□□□□ 0.37
SEC13-218ENST00000490283 SPEGQ15772 3267 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 A0A0U1RQS6 177 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 CEACAM5P06731 702 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms