RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	ITM2C	Q9NQX7	267 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	SYBU	Q9NX95	663 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	WSB2	Q9NYS7	404 aa	Predicted RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	USP36	Q9P275	1121 aa	Known RBP	18.22	■□□□□ 0.51
SRM-206	ENST00000490101	CHKB	Q9Y259	395 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	MAD1L1	Q9Y6D9	718 aa		18.22	■□□□□ 0.51
SRM-206	ENST00000490101	EDDM13	A0A1B0GTR0	161 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	SPAG6	O75602	509 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	SERPINA4	P29622	427 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	TPMT	P51580	245 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	GPX6	P59796	221 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	FAM193A	P78312	1265 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	SLC29A2	Q14542	456 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	PCID2	Q5JVF3	399 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	ALS2CL	Q60I27	953 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	STEAP4	Q687X5	459 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	DENND2C	Q68D51	928 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	FAM124A	Q86V42	546 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	CAMK1D	Q8IU85	385 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	PALM2	Q8IXS6	379 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	ZNF366	Q8N895	744 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	CHST14	Q8NCH0	376 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	PTCD2	Q8WV60	388 aa	Known RBP	18.21	■□□□□ 0.51
SRM-206	ENST00000490101	SPOCK2	Q92563	424 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	LRIG1	Q96JA1	1093 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	RANBP9	Q96S59	729 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	HEPH	Q9BQS7	1158 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	SAMD15	Q9P1V8	674 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	ZC3H7B	Q9UGR2	993 aa	Known RBP	18.21	■□□□□ 0.51
SRM-206	ENST00000490101	SUN2	Q9UH99	717 aa		18.21	■□□□□ 0.51
SRM-206	ENST00000490101	PCNX2	A6NKB5	2137 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101		A0A1W2PQ67	120 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	UPK3BL1	B0FP48	263 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	UPK3BL2	E5RIL1	263 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	PGLS	O95336	258 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	ACSL3	O95573	720 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	PDHA1	P08559	390 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	NUDT17	P0C025	328 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	CD59	P13987	128 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	PGAM1	P18669	254 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	ADRA1D	P25100	572 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	COPA	P53621	1224 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	CRADD	P78560	199 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	UBAP2	Q5T6F2	1119 aa	Known RBP	18.2	■□□□□ 0.5
SRM-206	ENST00000490101	ARMC12	Q5T9G4	340 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	CASC4	Q6P4E1	433 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	ECHDC3	Q96DC8	303 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	KIFC1	Q9BW19	673 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	SUV39H2	Q9H5I1	410 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	PLAC1	Q9HBJ0	212 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	MRM3	Q9HC36	420 aa	Known RBP	18.2	■□□□□ 0.5
SRM-206	ENST00000490101	SOX13	Q9UN79	622 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	PCDHB9	Q9Y5E1	797 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	WASF2	Q9Y6W5	498 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	CKAP5	Q14008	2032 aa		18.2	■□□□□ 0.5
SRM-206	ENST00000490101	ANKRD36	A6QL64	1941 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	SPEG	Q15772	3267 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	FAM237B	A0A1B0GVD1	139 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	ANKRD66	B4E2M5	251 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	BNIP3L	O60238	219 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	PIGN	O95427	931 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	OXTR	P30559	389 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	GK	P32189	559 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	GRIK2	Q13002	908 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	GALNT3	Q14435	633 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	QPCT	Q16769	361 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	C9orf64	Q5T6V5	341 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	LRIG3	Q6UXM1	1119 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	GDPD4	Q6W3E5	623 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	UNC5A	Q6ZN44	842 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	C3orf62	Q6ZUJ4	267 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	TMEM135	Q86UB9	458 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	LPCAT1	Q8NF37	534 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	PIH1D2	Q8WWB5	315 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	CAMK1G	Q96NX5	476 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	OSBPL1A	Q9BXW6	950 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	MTG2	Q9H4K7	406 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	ZDHHC6	Q9H6R6	413 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	VPS37B	Q9H9H4	285 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	DNAAF2	Q9NVR5	837 aa	Known RBP	18.19	■□□□□ 0.5
SRM-206	ENST00000490101	ZMIZ1	Q9ULJ6	1067 aa		18.19	■□□□□ 0.5
SRM-206	ENST00000490101	DSP	P15924	2871 aa	Known RBP	18.19	■□□□□ 0.5
SRM-206	ENST00000490101	ZFYVE26	Q68DK2	2539 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101		A0A087WUV0	522 aa	Predicted RBP	18.18	■□□□□ 0.5
SRM-206	ENST00000490101		A0A1B0GTW7	788 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	SH3BP5	O60239	455 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	SASH3	O75995	380 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	POLB	P06746	335 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	SSTR1	P30872	391 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	PHB	P35232	272 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	GRIA4	P48058	902 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	LAMB3	Q13751	1172 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	FRG1	Q14331	258 aa	Known RBP	18.18	■□□□□ 0.5
SRM-206	ENST00000490101	POU6F1	Q14863	301 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	CYS1	Q717R9	158 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	PPHLN1	Q8NEY8	458 aa	Known RBP	18.18	■□□□□ 0.5
SRM-206	ENST00000490101	CADM4	Q8NFZ8	388 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	OR2T3	Q8NH03	318 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	HCAR2	Q8TDS4	363 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms