RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 COL4A2P08572 1712 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 MUC22E2RYF6 1773 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 ZNF106Q9H2Y7 1883 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 DCLK1O15075 740 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 IRAK2O43187 625 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 CTSAP10619 480 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 KRT6CP48668 564 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 NOMO1Q15155 1222 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 INAVAQ3KP66 663 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 BSPRYQ5W0U4 402 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 LYPD8Q6UX82 237 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 LYSMD3Q7Z3D4 306 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 SIX6OS1Q8N1H7 587 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 GIMAP1Q8WWP7 306 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 DACT3Q96B18 629 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 ACSF2Q96CM8 615 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 RMND5BQ96G75 393 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 TMEM79Q9BSE2 394 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 TRIM62Q9BVG3 475 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ZNF717Q9BY31 904 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 FRMD8Q9BZ67 464 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 HOXD1Q9GZZ0 328 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 SEMA6AQ9H2E6 1030 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 PRDM5Q9NQX1 630 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 ABCC13Q9NSE7 274 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ABI2Q9NYB9 513 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 ANKMY1Q9P2S6 941 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ARHGAP26Q9UNA1 814 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 BOLA1Q9Y3E2 137 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 REV3LO60673 3130 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 CENPBD1B2RD01 187 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 PI4K2BG5E9Z4 385 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 APOC4-APOC2K7ER74 178 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 ARHGEF15O94989 841 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 MFN2O95140 757 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 APOC2P02655 101 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 TGM2P21980 687 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 PPM1AP35813 382 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 ALDH7A1P49419 539 aaKnown RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 GLUD2P49448 558 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 SULT1E1P49888 294 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 GNG2P59768 71 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 CLCQ05315 142 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 SMTNL2Q2TAL5 461 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 C5orf22Q49AR2 442 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 HSF5Q4G112 596 aaPredicted RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 KCNT1Q5JUK3 1230 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 AFMIDQ63HM1 303 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 TMEM150AQ86TG1 271 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 KLHDC8BQ8IXV7 354 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 TCEAL8Q8IYN2 117 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 RNF148Q8N7C7 305 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 FCRL2Q96LA5 508 aaPredicted RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 DHRS9Q9BPW9 319 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 OSBPL2Q9H1P3 480 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 ZNF229Q9UJW7 825 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 LCHNA4D1U4 455 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 HDAC3O15379 428 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 PEX14O75381 377 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 MAP4P27816 1152 aaKnown RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 RPL26P61254 145 aaKnown RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 MMRN1Q13201 1228 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 PAFAH1B3Q15102 231 aaKnown RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 TAF12Q16514 161 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 PPP1R3AQ16821 1122 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 FAM214AQ32MH5 1076 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 NCBP2-AS2Q69YL0 99 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 ATAD1Q8NBU5 361 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 ZNF461Q8TAF7 563 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 ADAMTS16Q8TE57 1224 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 TRUB1Q8WWH5 349 aaKnown RBP9.83□□□□□ -0.84
NOD1-208ENST00000489614 EBF4Q9BQW3 602 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 FBXO44Q9H4M3 255 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 VPS45Q9NRW7 570 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.83□□□□□ -0.84
NOD1-208ENST00000489614 TRAF6Q9Y4K3 522 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 INSL6Q9Y581 213 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 CDY1Q9Y6F8 540 aa9.83□□□□□ -0.84
NOD1-208ENST00000489614 MIA3Q5JRA6 1907 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 ALX3O95076 343 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 FOSL1P15407 271 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 DNAJB1P25685 340 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 GABRB3P28472 473 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 CHRNEQ04844 493 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 NIPAL4Q0D2K0 466 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 CAMK1Q14012 370 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 PPP2R5DQ14738 602 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 DDR2Q16832 855 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 CYP20A1Q6UW02 462 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 OTOP2Q7RTS6 562 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 GLRX5Q86SX6 157 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 AKAP14Q86UN6 197 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 MON1AQ86VX9 555 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 ZNF786Q8N393 782 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 LINC00469Q8N7U9 141 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 TNIP2Q8NFZ5 429 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 CSPG4P5Q96PW8 444 aa9.82□□□□□ -0.84
NOD1-208ENST00000489614 RAD9AQ99638 391 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms