RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 BBS5Q8N3I7 341 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TSEN2Q8NCE0 465 aaKnown RBP10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 CCDC110Q8TBZ0 833 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 TEKT5Q96M29 485 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 SPATA13Q96N96 652 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 RUNDC3BQ96NL0 473 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 PSKH2Q96QS6 385 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ANKZF1Q9H8Y5 726 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 RAB21Q9UL25 225 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 ATP8A1Q9Y2Q0 1164 aa10.6□□□□□ -0.71
SCAMP4-208ENST00000489554 MAP1BP46821 2468 aaKnown RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 FAM187AA6NFU0 413 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 NEMP2A6NFY4 417 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 MMP20O60882 483 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 PIAS2O75928 621 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 KRT14P02533 472 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 MMP2P08253 660 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 ALPPL2P10696 532 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 NME1P15531 152 aaKnown RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 CKMT2P17540 419 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 CR2P20023 1033 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 DGKAP23743 735 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 ACADVLP49748 655 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 YPEL5P62699 121 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 POLR2LP62875 67 aaKnown RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 BCL2L1Q07817 233 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 ILKQ13418 452 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 PDE1CQ14123 709 aaPredicted RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 PTK2BQ14289 1009 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 FZD2Q14332 565 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 ZNF235Q14590 738 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 SMAD1Q15797 465 aaKnown RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 P3H1Q32P28 736 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 TIGD7Q6NT04 549 aaPredicted RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 C8orf74Q6P047 294 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 CAMK1DQ8IU85 385 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 SLC25A45Q8N413 288 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 OR4C6Q8NH72 309 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 ARRDC2Q8TBH0 407 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 GRK7Q8WTQ7 553 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 NSMCE1Q8WV22 266 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■■■■■ 50.8
SCAMP4-208ENST00000489554 ZCCHC14Q8WYQ9 949 aaKnown RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 TADA1Q96BN2 335 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 ECHDC3Q96DC8 303 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 PKNOX2Q96KN3 472 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 WRAP53Q9BUR4 548 aaKnown RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 PARD6BQ9BYG5 372 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 PCDH12Q9NPG4 1184 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 DNAJC28Q9NX36 388 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 GRHL1Q9NZI5 618 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 OGFRQ9NZT2 677 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 SEPT10Q9P0V9 454 aa10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
SCAMP4-208ENST00000489554 TP53BP1Q12888 1972 aaPredicted RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 A0A1W2PQ67 120 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TTC24A2A3L6 582 aaPredicted RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TRIM38O00635 465 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MTSS1O43312 755 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 SIGLEC6O43699 453 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 HEXIM1O94992 359 aaKnown RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 IFNB1P01574 187 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 CSF2P04141 144 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 ITIH2P19823 946 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 NFKB1P19838 968 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 ECHS1P30084 290 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 IGFALSP35858 605 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MMP12P39900 470 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MAGEA6P43360 314 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MMP13P45452 471 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 RPL21P46778 160 aaKnown RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 SCNN1BP51168 640 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 THOP1P52888 689 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 NIPAL4Q0D2K0 466 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 DNAJC3Q13217 504 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 LRRC14Q15048 493 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 AGERQ15109 404 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 PROX2Q3B8N5 592 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 RALGPS1Q5JS13 557 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 FBXO38Q6PIJ6 1188 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 SYDE1Q6ZW31 735 aaPredicted RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TMPRSS12Q86WS5 348 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 PAF1Q8N7H5 531 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TP53I13Q8NBR0 393 aaPredicted RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 BTN2A2Q8WVV5 523 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 OXNAD1Q96HP4 312 aaPredicted RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 AGAP3Q96P47 875 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 VAT1Q99536 393 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MGME1Q9BQP7 344 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 ERP44Q9BS26 406 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 MLPHQ9BV36 600 aaPredicted RBP10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 DUSP23Q9BVJ7 150 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms