RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 C3orf30Q96M34 536 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 COG8Q96MW5 612 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 RNF39Q9H2S5 420 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 AKTIPQ9H8T0 292 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 TBC1D13Q9NVG8 400 aa19.52■□□□□ 0.71
HMG20B-213ENST00000488973 COL4A4P53420 1690 aaPredicted RBP19.51■□□□□ 0.71
HMG20B-213ENST00000488973 TTC24A2A3L6 582 aaPredicted RBP19.51■□□□□ 0.71
HMG20B-213ENST00000488973 TRIM64BA6NI03 449 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 NR5A2O00482 541 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 SUPT7LO94864 414 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 CYP2C18P33260 490 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 SLC26A3P40879 764 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 SLC5A3P53794 718 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 PMS2P3Q13401 168 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 SEPT6Q14141 434 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 MOB2Q70IA6 237 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 BHLHA9Q7RTU4 235 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 CMTR2Q8IYT2 770 aaKnown RBP19.51■□□□□ 0.71
HMG20B-213ENST00000488973 EDEM1Q92611 657 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 FAM149AA5PLN7 773 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 RRN3P2A6NIE6 340 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 MAFKO60675 156 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 PMPCBO75439 489 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 MT-CO1P00395 513 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 GPIP06744 558 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 UGT1A6P19224 532 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 ADCYAP1R1P41586 468 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 NFKB2Q00653 900 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 HECTD2Q5U5R9 776 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 FASTKD5Q7L8L6 764 aaKnown RBP19.51■□□□□ 0.71
HMG20B-213ENST00000488973 GALNT7Q86SF2 657 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 ADGRG5Q8IZF4 528 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 TRPV3Q8NET8 790 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 ANKRD49Q8WVL7 239 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 CLIP3Q96DZ5 547 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 MRGPRX2Q96LB1 330 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 MUC3BQ9H195 1237 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 GID8Q9NWU2 228 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 NEU3Q9UQ49 428 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 PIN4Q9Y237 131 aaKnown RBP19.51■□□□□ 0.71
HMG20B-213ENST00000488973 TSC22D4Q9Y3Q8 395 aa19.51■□□□□ 0.71
HMG20B-213ENST00000488973 ANGPT2O15123 496 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 ACOX3O15254 700 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 CLOCKO15516 846 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 SNAP91O60641 907 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 SEC24DO94855 1032 aaPredicted RBP19.5■□□□□ 0.71
HMG20B-213ENST00000488973 CHRNA4P43681 627 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 FOXM1Q08050 763 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 RAB39AQ14964 217 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 UNC50Q53HI1 259 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 LDLRAD1Q5T700 205 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 MIER2Q8N344 545 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 ASB2Q96Q27 587 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 YTHDF1Q9BYJ9 559 aaKnown RBP19.5■□□□□ 0.71
HMG20B-213ENST00000488973 MUC13Q9H3R2 512 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 IL1RL2Q9HB29 575 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 QPCTLQ9NXS2 382 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 SCHIP1Q9P0W5 487 aaPredicted RBP19.5■□□□□ 0.71
HMG20B-213ENST00000488973 EGFL7Q9UHF1 273 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 OAZ3Q9UMX2 235 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 IQCA1LA6NCM1 817 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 FXYD1O00168 92 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 WISP3O95389 354 aaPredicted RBP19.5■□□□□ 0.71
HMG20B-213ENST00000488973 DEPDC1Q5TB30 811 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 CTU1Q7Z7A3 348 aaKnown RBP19.5■□□□□ 0.71
HMG20B-213ENST00000488973 TBC1D15Q8TC07 691 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 CYGBQ8WWM9 190 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 COX4I2Q96KJ9 171 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 CMTM6Q9NX76 183 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 ITM2BQ9Y287 266 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 VWA7Q9Y334 891 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 TIMM22Q9Y584 194 aa19.5■□□□□ 0.71
HMG20B-213ENST00000488973 MATN4O95460 622 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 HLA-DQB2P05538 268 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 FGF4P08620 206 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 HOXD8P13378 290 aaPredicted RBP19.49■□□□□ 0.71
HMG20B-213ENST00000488973 SLC6A2P23975 617 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 CAPGP40121 348 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 HERVK_113P63132 956 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 COQ5Q5HYK3 327 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 GPR107Q5VW38 600 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 TAC4Q86UU9 113 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 RNF34Q969K3 372 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 HDAC10Q969S8 669 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 PCED1BQ96HM7 432 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 CNDP2Q96KP4 475 aaKnown RBP19.49■□□□□ 0.71
HMG20B-213ENST00000488973 SH3GL1Q99961 368 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 ERVK-6Q9BXR3 956 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 PAIP1Q9H074 479 aaKnown RBP19.49■□□□□ 0.71
HMG20B-213ENST00000488973 ALG9Q9H6U8 611 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 TMEM9Q9P0T7 183 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 HHLA1C9JL84 531 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 ARPC2O15144 300 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 MMP3P08254 477 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 GFAPP14136 432 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 ZNF12P17014 697 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 CAPN3P20807 821 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 TMED10P49755 219 aaKnown RBP19.49■□□□□ 0.71
HMG20B-213ENST00000488973 ANKDD1AQ495B1 522 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 VPS26BQ4G0F5 336 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms