RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 CATSPER3Q86XQ3 398 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZDHHC13Q8IUH4 622 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SLC22A15Q8IZD6 547 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZCCHC7Q8N3Z6 543 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZNF366Q8N895 744 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GLB1L3Q8NCI6 653 aaPredicted RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 ST8SIA4Q92187 359 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 DDX1Q92499 740 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 AKAP1Q92667 903 aaKnown RBP eCLIP6.36□□□□□ -1.39
SIK3-212ENST00000488337 PWWP2AQ96N64 755 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 KCNK16Q96T55 309 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 TRIM56Q9BRZ2 755 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 FGFBP2Q9BYJ0 223 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PCIF1Q9H4Z3 704 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PDZD7Q9H5P4 517 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 LRRC40Q9H9A6 602 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 STARD7Q9NQZ5 370 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 MTMR4Q9NYA4 1195 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 TRPS1Q9UHF7 1281 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZNF229Q9UJW7 825 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SERPINA10Q9UK55 444 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 COG5Q9UP83 839 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ALG6Q9Y672 507 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 COPG1Q9Y678 874 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 PIAS3Q9Y6X2 628 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 BAZ2AQ9UIF9 1905 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 RPS10-NUDT3A0A1W2PQS6 291 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 EFCAB7A8K855 629 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 H0Y626 953 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 AP3D1O14617 1153 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 TMEM253P0C7T8 217 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GJC1P36383 396 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 CAP2P40123 477 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PSMD8P48556 350 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 CASP4P49662 377 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 MRPS22P82650 360 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 ITPK1Q13572 414 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 NRF1Q16656 503 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SPATS1Q496A3 300 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZC3H12BQ5HYM0 836 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 ADGRD1Q6QNK2 874 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 UTS2BQ765I0 119 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GALNT10Q86SR1 603 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 RETREG3Q86VR2 466 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 FAM178BQ8IXR5 827 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ADGRF4Q8IZF3 695 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 DEFB107AQ8IZN7 70 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PACRGLQ8N7B6 248 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 NCLNQ969V3 563 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 UBXN10Q96LJ8 280 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 C20orf27Q9GZN8 174 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 TMEM245Q9H330 911 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 BRD7Q9NPI1 651 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SIRPGQ9P1W8 387 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 COL20A1Q9P218 1284 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 EXTL2Q9UBQ6 330 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GRIP1Q9Y3R0 1128 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 TMEM82A0PJX8 343 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GRXCR2A6NFK2 248 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZBTB5O15062 677 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SLITRK3O94933 977 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GABARAPO95166 117 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PRKCBP05771 671 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ATP5C1P36542 298 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 PCDH1Q08174 1060 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 FAPQ12884 760 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 FASTKD3Q14CZ7 662 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 ECM1Q16610 540 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GEN1Q17RS7 908 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 C16orf46Q6P387 395 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 METTL4Q8N3J2 472 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ALKBH8Q96BT7 664 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 CCDC124Q96CT7 223 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 ZFYVE19Q96K21 471 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 REEP2Q9BRK0 252 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 C12orf65Q9H3J6 166 aaKnown RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 RANBP3Q9H6Z4 567 aaPredicted RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 CYP4F11Q9HBI6 524 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ACP6Q9NPH0 428 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 STOML2Q9UJZ1 356 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 NAALAD2Q9Y3Q0 740 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PCDHGA7Q9Y5G6 932 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 PDE4DIPQ5VU43 2346 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SAGE2PA6NJ88 616 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ARGFXA6NJG6 315 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 NT5C1B-RDH14C9J2C7 533 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SYN3O14994 580 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 SERPINI2O75830 405 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 ALBP02768 609 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 FTLP02792 175 aaPredicted RBP6.36□□□□□ -1.39
SIK3-212ENST00000488337 CYP11A1P05108 521 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 GLAP06280 429 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 FABP1P07148 127 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 HSMCR30P0CW71 290 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 DGKQP52824 942 aa6.36□□□□□ -1.39
SIK3-212ENST00000488337 BNC1Q01954 994 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms