RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 BMFQ96LC9 184 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 TRIM51Q9BSJ1 452 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 EDEM2Q9BV94 578 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 GPR63Q9BZJ6 419 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 CAAP1Q9H8G2 361 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 ZFYVE1Q9HBF4 777 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 MAGEE1Q9HCI5 957 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 SLC6A14Q9UN76 642 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
UBE4B-210ENST00000488228 NEU2Q9Y3R4 380 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 SNX11Q9Y5W9 270 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 TCRBV7S3A2A0A539 114 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 PRR5-ARHGAP8B1AHC4 643 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 KIF2AO00139 706 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 VILLO15195 856 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 TMEM63AO94886 807 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 TPH1P17752 444 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 PTGIRP43119 386 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 C21orf59P57076 290 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 NXPH1P58417 271 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 DR1Q01658 176 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 LMNB2Q03252 620 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 MTM1Q13496 603 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 PTK6Q13882 451 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 SEPT6Q14141 434 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 KCNJ11Q14654 390 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 AGERQ15109 404 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 ANKRD22Q5VYY1 191 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 RAET1GQ6H3X3 334 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 PPP1R21Q6ZMI0 780 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 Q6ZSR6 202 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 MICALCLQ6ZW33 695 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 TECPR1Q7Z6L1 1165 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 SPATS2Q86XZ4 545 aaKnown RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 JAMLQ86YT9 394 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 KIAA2013Q8IYS2 634 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 CBARPQ8N350 705 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 MFSD2AQ8NA29 543 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 OR52K1Q8NGK4 314 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 LRRC45Q96CN5 670 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 AP2M1Q96CW1 435 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 LENG8Q96PV6 779 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 KRT12Q99456 494 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 RIOK2Q9BVS4 552 aaKnown RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 GTPBP2Q9BX10 602 aaKnown RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 NUSAP1Q9BXS6 441 aaKnown RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 ABCG8Q9H221 673 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 BPIFA1Q9NP55 256 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 EIF2B3Q9NR50 452 aaKnown RBP11.03□□□□□ -0.64
UBE4B-210ENST00000488228 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 RNF14Q9UBS8 474 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 ASIC3Q9UHC3 531 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 PCYOX1Q9UHG3 505 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 CDC23Q9UJX2 597 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 ANKRD6Q9Y2G4 727 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 OR1A2Q9Y585 309 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 KCTD3Q9Y597 815 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 CFAP54Q96N23 3096 aa11.03□□□□□ -0.64
UBE4B-210ENST00000488228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.02□□□□□ -0.65
UBE4B-210ENST00000488228 CCDC78A2IDD5 438 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 ERI2A8K979 691 aaKnown RBP11.02□□□□□ -0.65
UBE4B-210ENST00000488228 CCDC188H7C350 402 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 TLR4O00206 839 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 TTI1O43156 1089 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 GDF9O60383 454 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 SUN1O94901 812 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 SOD1P00441 154 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 CTSKP43235 329 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 SPINT3P49223 89 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 PFN3P60673 137 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 IL9RQ01113 521 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 PDE1CQ14123 709 aaPredicted RBP11.02□□□□□ -0.65
UBE4B-210ENST00000488228 INPP5AQ14642 412 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 PTPRCAPQ14761 206 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 POU6F1Q14863 301 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 ESRP1Q6NXG1 681 aaKnown RBP11.02□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF534Q76KX8 674 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 TMC3Q7Z5M5 1100 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 TRIM74Q86UV6 250 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 SPATA4Q8NEY3 305 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 CCHCR1Q8TD31 782 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 CPT1BQ92523 772 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 SLCO2A1Q92959 643 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 KLHDC7BQ96G42 594 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 WDR26Q9H7D7 661 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 IL21RQ9HBE5 538 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 GPR27Q9NS67 375 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 HACD3Q9P035 362 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 DNAH14Q0VDD8 3507 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 PIKFYVEQ9Y2I7 2098 aa11.02□□□□□ -0.65
UBE4B-210ENST00000488228 FADS2P1A8MWK0 482 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 CCL22O00626 93 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 ARHGAP33O14559 1287 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 GPR39O43194 453 aa11.01□□□□□ -0.65
UBE4B-210ENST00000488228 PSMD3O43242 534 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms