RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 ZFAND2BQ8WV99 257 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 LPGAT1Q92604 370 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 RNF31Q96EP0 1072 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 ZNF830Q96NB3 372 aaPredicted RBP3.65□□□□□ -1.83
HFM1-208ENST00000488023 ZNF558Q96NG5 402 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 CINPQ9BW66 212 aaPredicted RBP3.65□□□□□ -1.83
HFM1-208ENST00000488023 C1QTNF5Q9BXJ0 243 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 CADM1Q9BY67 442 aaKnown RBP3.65□□□□□ -1.83
HFM1-208ENST00000488023 TRIM7Q9C029 511 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 ACTR3BQ9P1U1 418 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 TESQ9UGI8 421 aaKnown RBP3.65□□□□□ -1.83
HFM1-208ENST00000488023 FBXO4Q9UKT5 387 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 NFS1Q9Y697 457 aa3.65□□□□□ -1.83
HFM1-208ENST00000488023 MAST3O60307 1309 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 EDDM13A0A1B0GTR0 161 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 LNP1A1A4G5 178 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 SEC14L5O43304 696 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 RTN2O75298 545 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 CNTN5O94779 1100 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 ZWINTO95229 277 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 SERPINC1P01008 464 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 GBAP04062 536 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 FCGR2AP12318 317 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 SLC2A4P14672 509 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 TMEM11P17152 192 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 ANXA7P20073 488 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 CTGFP29279 349 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 IL15P40933 162 aaPredicted RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 BLKP51451 505 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 VAV2P52735 878 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 ZNF132P52740 706 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 PSG6Q00889 435 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 ACSM2AQ08AH3 577 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 GRIK3Q13003 919 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 RRS1Q15050 365 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 NAB2Q15742 525 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 ACSM2BQ68CK6 577 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 SP5Q6BEB4 398 aaPredicted RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 LRRC8EQ6NSJ5 796 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 FBXO42Q6P3S6 717 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 MSANTD1Q6ZTZ1 278 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 TAOK1Q7L7X3 1001 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 MDGA2Q7Z553 956 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 KLHL7Q8IXQ5 586 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 SCYL3Q8IZE3 742 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 GUF1Q8N442 669 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 EXD3Q8N9H8 876 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 KDM1BQ8NB78 822 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 NHLRC2Q8NBF2 726 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 NEK11Q8NG66 645 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 AKAP1Q92667 903 aaKnown RBP eCLIP3.64□□□□□ -1.83
HFM1-208ENST00000488023 BBS4Q96RK4 519 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 PIMREGQ9BSJ6 248 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 MLPHQ9BV36 600 aaPredicted RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 CNOT10Q9H9A5 744 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 SFXN1Q9H9B4 322 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 Q9N2J8 555 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 ENTPD7Q9NQZ7 604 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.64□□□□□ -1.834e-8■□□□□ 9.2
HFM1-208ENST00000488023 ANO10Q9NW15 660 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 PSD3Q9NYI0 1048 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 CGNQ9P2M7 1197 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 DKK3Q9UBP4 350 aa3.64□□□□□ -1.83
HFM1-208ENST00000488023 HOOK1Q9UJC3 728 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 AAR2Q9Y312 384 aaKnown RBP3.64□□□□□ -1.83
HFM1-208ENST00000488023 SPATA31A6Q5VVP1 1343 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 CBY3A6NI87 242 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 KDM4EB2RXH2 506 aaPredicted RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 MCIDASD6RGH6 385 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 PRYO14603 147 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 CLIC2O15247 247 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 SLC16A3O15427 465 aaKnown RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 TMPRSS11DO60235 418 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ZC3H11AO75152 810 aaKnown RBP eCLIP3.63□□□□□ -1.835e-7■■□□□ 11.8
HFM1-208ENST00000488023 TRUB2O95900 331 aaKnown RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 TFP02787 698 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 FAM58BPP0C7Q3 252 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 IRF1P10914 325 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 FERP16591 822 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 TYMPP19971 482 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ACHEP22303 614 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 SFPQP23246 707 aaKnown RBP eCLIP3.63□□□□□ -1.83
HFM1-208ENST00000488023 NDUFS1P28331 727 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 DUSP1P28562 367 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 HOXA11P31270 313 aaPredicted RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 MPLP40238 635 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 CASP3P42574 277 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 TKTL1P51854 596 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 LUMP51884 338 aaPredicted RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 ARSFP54793 590 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ADPRHP54922 357 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 CDH13P55290 713 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 SUMO2P61956 95 aaKnown RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 MZT1Q08AG7 82 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 LMAN2Q12907 356 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 FOXI1Q12951 378 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 PPIGQ13427 754 aaKnown RBP eCLIP3.63□□□□□ -1.831e-8■■■■■ 31.6
HFM1-208ENST00000488023 KCNC3Q14003 757 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 DRAP1Q14919 205 aaPredicted RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 PGM5Q15124 567 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms