RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 LIG3P49916 1009 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 TPMTP51580 245 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CRADDP78560 199 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 PTSQ03393 145 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 MGAT5Q09328 741 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 SGCGQ13326 291 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ITGA9Q13797 1035 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 GAS6Q14393 721 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 AGERQ15109 404 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CNGA3Q16281 694 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ZNF284Q2VY69 593 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 POM121L1PQ3SYA9 428 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 GPR33Q49SQ1 333 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 USP39Q53GS9 565 aaKnown RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 RNF187Q5TA31 235 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 LGSNQ5TDP6 509 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 LYPLAL1Q5VWZ2 237 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CWF19L1Q69YN2 538 aaKnown RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CERS6Q6ZMG9 384 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 LYSMD3Q7Z3D4 306 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 GSPT2Q8IYD1 628 aaKnown RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 MDGA1Q8NFP4 955 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 OR4K2Q8NGD2 314 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 OR2T34Q8NGX1 318 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 OR14C36Q8NHC7 312 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 HEXDCQ8WVB3 486 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 UBLCP1Q8WVY7 318 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ULK4Q96C45 1275 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 MFSD3Q96ES6 412 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CERS2Q96G23 380 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CFAP36Q96G28 342 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 CDKN2AIPNLQ96HQ2 116 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 TCF12Q99081 682 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ZSCAN5AQ9BUG6 496 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 FAM83DQ9H4H8 585 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ACSS3Q9H6R3 686 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 VIPAS39Q9H9C1 493 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 PPANQ9NQ55 473 aaKnown RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 C20orf96Q9NUD7 363 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 SPATA6Q9NWH7 488 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 DLGAP2Q9P1A6 1054 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 TXNDC16Q9P2K2 825 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 IKBKGQ9Y6K9 419 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 SLC30A1Q9Y6M5 507 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 NYNRINQ9P2P1 1898 aaKnown RBP11.03□□□□□ -0.64
HDLBP-242ENST00000488013 COL4A2P08572 1712 aa11.03□□□□□ -0.64
HDLBP-242ENST00000488013 ZCWPW2A0A1B0GU75 182 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TCRBV9S1A1TA0A576 114 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ANTXRLA6NF34 631 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 LAMTOR5O43504 91 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ATP8B1O43520 1251 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TCEA3O75764 348 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TM7SF2O76062 418 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 VAPBO95292 243 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ACSL3O95573 720 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 DCNP07585 359 aaKnown RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 PIRTP0C851 137 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ITGALP20701 1170 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 LHCGRP22888 699 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TEAD1P28347 426 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 CD6P30203 668 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 HSD17B3P37058 310 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ADPRHP54922 357 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 CACNG1Q06432 222 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 DPTQ07507 201 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 IFFO1Q0D2I5 559 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 RALGDSQ12967 914 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 MTM1Q13496 603 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 SLC29A2Q14542 456 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 FASTKD3Q14CZ7 662 aaKnown RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ACOX1Q15067 660 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 FASTKD1Q53R41 847 aaKnown RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 HP1BP3Q5SSJ5 553 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 NEPROQ6NW34 567 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ESRP1Q6NXG1 681 aaKnown RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 LIPIQ6XZB0 460 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 GALNT7Q86SF2 657 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 SLC26A11Q86WA9 606 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 TRIM69Q86WT6 500 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 HORMAD1Q86X24 394 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 LRRC6Q86X45 466 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 IGDCC3Q8IVU1 814 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 AGGF1Q8N302 714 aaeCLIP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 GPR150Q8NGU9 434 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 OR6P1Q8NGX9 317 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 OR4L1Q8NH43 312 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 FAM174AQ8TBP5 190 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ANKRD7Q92527 254 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 HDAC10Q969S8 669 aa11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ROPN1BQ9BZX4 212 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ROPN1Q9HAT0 212 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 POLR3BQ9NW08 1133 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-242ENST00000488013 ZFATQ9P243 1243 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms