RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 NSMCE1Q8WV22 266 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 SYN2Q92777 582 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 DTD2Q96FN9 168 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 SMIM14Q96QK8 99 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 MCCC1Q96RQ3 725 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 NUP85Q9BW27 656 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 SUDS3Q9H7L9 328 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 NT5MQ9NPB1 228 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 PHPT1Q9NRX4 125 aaPredicted RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 PISDQ9UG56 409 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 IP6K2Q9UHH9 426 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 PPIL1Q9Y3C6 166 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 LOXL2Q9Y4K0 774 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 ST14Q9Y5Y6 855 aa12.19□□□□□ -0.46
VPS16-208ENST00000487461 BZW2Q9Y6E2 419 aaKnown RBP12.19□□□□□ -0.46
VPS16-208ENST00000487461 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
VPS16-208ENST00000487461 A0A087X0T9 212 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 A0A1W2PQJ5 194 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 PSMD11O00231 422 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 NVLO15381 856 aaKnown RBP12.18□□□□□ -0.46
VPS16-208ENST00000487461 NUDT21O43809 227 aaKnown RBP12.18□□□□□ -0.46
VPS16-208ENST00000487461 PDHA1P08559 390 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 CD48P09326 243 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 JMJD7P0C870 316 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 FAM228BP0C875 321 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ITIH1P19827 911 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 AK4P27144 223 aaPredicted RBP12.18□□□□□ -0.46
VPS16-208ENST00000487461 ETV5P41161 510 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 GNPDA1P46926 289 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ARSEP51690 589 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 CDH6P55285 790 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 OR1D5P58170 312 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 CDK3Q00526 305 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 FANCCQ00597 558 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 TGIF1Q15583 401 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ATP13A4Q4VNC1 1196 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ARMC12Q5T9G4 340 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 USP53Q70EK8 1073 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 SLITRK4Q8IW52 837 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 FAM71BQ8TC56 605 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ZDHHC1Q8WTX9 485 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 CCNL2Q96S94 520 aaPredicted RBP12.18□□□□□ -0.46
VPS16-208ENST00000487461 SEMA6CQ9H3T2 930 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 CBX8Q9HC52 389 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 TRNAU1APQ9NX07 287 aaKnown RBP12.18□□□□□ -0.46
VPS16-208ENST00000487461 KCTD5Q9NXV2 234 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 TAAR2Q9P1P5 351 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 SUFUQ9UMX1 484 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 SLC17A4Q9Y2C5 497 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 PLEKHM1Q9Y4G2 1056 aa12.18□□□□□ -0.46
VPS16-208ENST00000487461 ZNF462Q96JM2 2506 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 GOLGA6CA6NDK9 693 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 GOLGA6BA6NDN3 693 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 FZD6O60353 706 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ECEL1O95672 775 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 SERPING1P05155 500 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 GOLGA6DP0CG33 693 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 NFKBIAP25963 317 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 TEAD1P28347 426 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 SERPINB6P35237 376 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ADCY8P40145 1251 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 CTBSQ01459 385 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 PTSQ03393 145 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 DPTQ07507 201 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ITKQ08881 620 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
VPS16-208ENST00000487461 KRT81Q14533 505 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 NFKBIBQ15653 356 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 AMZ1Q400G9 498 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 RAET1GQ6H3X3 334 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ZNF574Q6ZN55 896 aaPredicted RBP12.17□□□□□ -0.46
VPS16-208ENST00000487461 LUZP1Q86V48 1076 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 CPNE8Q86YQ8 564 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 LRRC49Q8IUZ0 686 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 KIAA1524Q8TCG1 905 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 PATE1Q8WXA2 126 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 USP7Q93009 1102 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 GSDMCQ9BYG8 508 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ABCG8Q9H221 673 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 RDH14Q9HBH5 336 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 GOLGA6AQ9NYA3 693 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 CD84Q9UIB8 345 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 CAPN11Q9UMQ6 739 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 TMEM98Q9Y2Y6 226 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 CFAP46Q8IYW2 2715 aa12.17□□□□□ -0.46
VPS16-208ENST00000487461 ATMQ13315 3056 aa12.16□□□□□ -0.46
VPS16-208ENST00000487461 PRAMEF33A0A0G2JMD5 474 aa12.16□□□□□ -0.46
VPS16-208ENST00000487461 CAPN8A6NHC0 703 aa12.16□□□□□ -0.46
VPS16-208ENST00000487461 RHPN2P1A8MT19 583 aa12.16□□□□□ -0.46
VPS16-208ENST00000487461 MYO1FO00160 1098 aa12.16□□□□□ -0.46
VPS16-208ENST00000487461 MFSD11O43934 449 aa12.16□□□□□ -0.46
VPS16-208ENST00000487461 PRAMEF10O60809 474 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms