RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 EML2O95834 649 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 NR1D1P20393 614 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 CSTF2P33240 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
MCF2L-228ENST00000487354 ADCY8P40145 1251 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 ZNF143P52747 638 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-228ENST00000487354 NDST2P52849 883 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 RPL7AP62424 266 aaKnown RBP15.32■□□□□ 0.04
MCF2L-228ENST00000487354 OGDHQ02218 1023 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 PTPRRQ15256 657 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 CAMK4Q16566 473 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 CA9Q16790 459 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 TMEM71Q6P5X7 295 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 MON1BQ7L1V2 547 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 HSD11B1LQ7Z5J1 315 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 FAM129CQ86XR2 697 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 PHF13Q86YI8 300 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-228ENST00000487354 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 DTD2Q96FN9 168 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 CTRCQ99895 268 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 ASPSCR1Q9BZE9 553 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 GPN2Q9H9Y4 310 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-228ENST00000487354 APMAPQ9HDC9 416 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 PHPT1Q9NRX4 125 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-228ENST00000487354 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
MCF2L-228ENST00000487354 PRR19A6NJB7 356 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 SIGLEC16A6NMB1 481 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 CAPN5O15484 640 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 MTSS1O43312 755 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 HTRA2O43464 458 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 PALMO75781 387 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 HEXIM1O94992 359 aaKnown RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 DLGAP3O95886 979 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 IVLP07476 585 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 ETV3P41162 512 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 FASLGP48023 281 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 RAB15P59190 212 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 BCL2L1Q07817 233 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 DCAF12Q5T6F0 453 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 SCYL2Q6P3W7 929 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 ARHGAP22Q7Z5H3 698 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 TP53INP2Q8IXH6 220 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 NLGN4XQ8N0W4 816 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 NLGN4YQ8NFZ3 816 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 KCNK4Q9NYG8 393 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 ADAM22Q9P0K1 906 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 TP53TG5Q9Y2B4 290 aa15.31■□□□□ 0.04
MCF2L-228ENST00000487354 TMEM184BQ9Y519 407 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 PCYT1BQ9Y5K3 369 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-228ENST00000487354 F8A1P23610 371 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 TEAD1P28347 426 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 SOX5P35711 763 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 UQCRFS1P47985 274 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 AIF1P55008 147 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 TPI1P60174 286 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 GPLD1P80108 840 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 MC2RQ01718 297 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 NSUN2Q08J23 767 aaKnown RBP eCLIP15.3■□□□□ 0.04
MCF2L-228ENST00000487354 CLEC16AQ2KHT3 1053 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 DEFB109BQ30KR1 87 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 DPCR1Q3MIW9 517 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 C4orf17Q53FE4 359 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-228ENST00000487354 TRIM72Q6ZMU5 477 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 RFLNAQ6ZTI6 216 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 SLC37A2Q8TED4 501 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 APOBEC4Q8WW27 367 aaKnown RBP15.3■□□□□ 0.04
MCF2L-228ENST00000487354 STARD8Q92502 1023 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 MCEEQ96PE7 176 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 TEFMQ96QE5 360 aaKnown RBP15.3■□□□□ 0.04
MCF2L-228ENST00000487354 PEBP4Q96S96 227 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 DPYSL5Q9BPU6 564 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 SELENOOQ9BVL4 669 aa15.3■□□□□ 0.04
MCF2L-228ENST00000487354 CINPQ9BW66 212 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-228ENST00000487354 MRPS18BQ9Y676 258 aaKnown RBP15.3■□□□□ 0.04
MCF2L-228ENST00000487354 A0A0U1RQS6 177 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 NPIPB15A6NHN6 443 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-228ENST00000487354 PEX11BO96011 259 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 MAP4P27816 1152 aaKnown RBP15.29■□□□□ 0.04
MCF2L-228ENST00000487354 VIPR1P32241 457 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 HTR7P34969 479 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 ACTR1BP42025 376 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 SCNN1BP51168 640 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 ACTR1AP61163 376 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 AP1S1P61966 158 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 ABHD18Q0P651 414 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 CRTC2Q53ET0 693 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-228ENST00000487354 CYP4V2Q6ZWL3 525 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-228ENST00000487354 TSPAN33Q86UF1 283 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 FAM114A1Q8IWE2 563 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 NRSN1Q8IZ57 195 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 PGBD5Q8N414 524 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 SFRP1Q8N474 314 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 ARFGAP1Q8N6T3 406 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 FNIP1Q8TF40 1166 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 PSKH2Q96QS6 385 aa15.29■□□□□ 0.04
MCF2L-228ENST00000487354 SAMSN1Q9NSI8 373 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms