RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TEX11Q8IYF3 940 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 ADGRF4Q8IZF3 695 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 KCTD6Q8NC69 237 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 RASSF8Q8NHQ8 419 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 NEK9Q8TD19 979 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 UROC1Q96N76 676 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 TIMP4Q99727 224 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 EFHD1Q9BUP0 239 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 ACTR5Q9H9F9 607 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-216ENST00000487043 ASAH2Q9NR71 780 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 SPATS2LQ9NUQ6 558 aaKnown RBP4.18□□□□□ -1.74
PTCD3-216ENST00000487043 PLK2Q9NYY3 685 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 CNOT8Q9UFF9 292 aaKnown RBP4.18□□□□□ -1.74
PTCD3-216ENST00000487043 NOL7Q9UMY1 257 aaKnown RBP4.18□□□□□ -1.74
PTCD3-216ENST00000487043 FAM96BQ9Y3D0 163 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 DMRT1Q9Y5R6 373 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 ZNF831Q5JPB2 1677 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 ATP10DQ9P241 1426 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 PXDNLA1KZ92 1463 aa4.18□□□□□ -1.74
PTCD3-216ENST00000487043 IBTKQ9P2D0 1353 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 NHSQ6T4R5 1651 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 BRWD3Q6RI45 1802 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SBF2Q86WG5 1849 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 A0A1W2PRG0 241 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TYW5A2RUC4 315 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 DPPA5A6NC42 116 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CBY3A6NI87 242 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 A8MZ25 164 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SH2B2O14492 632 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CTDSP2O14595 271 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ENTPD3O75355 529 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 NEURL1O76050 574 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TMCC1O94876 653 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 IPO7O95373 1038 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 IGHDP01880 384 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TFP02787 698 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 IGKV5-2P06315 115 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 PRR35P0CG20 571 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TFEBP19484 476 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SAT1P21673 171 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 GPD1P21695 349 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 YWHAQP27348 245 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CIITAP33076 1130 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 GABRB2P47870 512 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 MRPL12P52815 198 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CACNA2D1P54289 1103 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 HDAC4P56524 1084 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SOX10P56693 466 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SLC18A2Q05940 514 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 PMPCAQ10713 525 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CDC16Q13042 620 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 AIMP2Q13155 320 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ITPK1Q13572 414 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 FGFBP1Q14512 234 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 PSMD6Q15008 389 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 PGM5Q15124 567 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ZSCAN23Q3MJ62 389 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TMEM119Q4V9L6 283 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 PRAMEF17Q5VTA0 474 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TBC1D9BQ66K14 1250 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 KIAA0930Q6ICG6 404 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 LRRC8EQ6NSJ5 796 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 DPY19L2P1Q6NXN4 242 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 FBXO42Q6P3S6 717 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 FAM83HQ6ZRV2 1179 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CENPQQ7L2Z9 268 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ZNF627Q7L945 461 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ANKRD23Q86SG2 305 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TBC1D26Q86UD7 250 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 IGFN1Q86VF2 1251 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TICAM1Q8IUC6 712 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CADM3Q8N126 398 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 POC5Q8NA72 575 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CMASQ8NFW8 434 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 OSR1Q8TAX0 266 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 HDAC7Q8WUI4 952 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 TMEM170AQ8WVE7 144 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 NELL1Q92832 810 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SAT2Q96F10 170 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ZNF419Q96HQ0 510 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CNDP2Q96KP4 475 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 AGAP2Q99490 1192 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 MEIS3Q99687 375 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 NCAPGQ9BPX3 1015 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SRSF8Q9BRL6 282 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 DUSP26Q9BV47 211 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 KLK15Q9H2R5 256 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 MOV10Q9HCE1 1003 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 SH3GLB2Q9NR46 395 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 MRPL15Q9P015 296 aaKnown RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 PLEKHB1Q9UF11 243 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 NENFQ9UMX5 172 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 ZNF711Q9Y462 761 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 WNT6Q9Y6F9 365 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 UTYO14607 1347 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 AOX1Q06278 1338 aa4.17□□□□□ -1.74
PTCD3-216ENST00000487043 CICQ96RK0 1608 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-216ENST00000487043 POLR2AP24928 1970 aaKnown RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 TJP1Q07157 1748 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms