RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 RAP1GDS1P52306 607 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 COPAP53621 1224 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 ERVFC1P60507 584 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 NFKB2Q00653 900 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 PDAP1Q13442 181 aaKnown RBP20.33■□□□□ 0.85
HPS3-206ENST00000486530 ISCA2Q86U28 154 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 EFHBQ8N7U6 833 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 KREMEN2Q8NCW0 462 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 FBXO27Q8NI29 283 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 ACDQ96AP0 544 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 CCDC28BQ9BUN5 200 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 CCDC68Q9H2F9 335 aa20.33■□□□□ 0.85
HPS3-206ENST00000486530 UBA6A0AVT1 1052 aaPredicted RBP20.33■□□□□ 0.84
HPS3-206ENST00000486530 STX7O15400 261 aaKnown RBP20.33■□□□□ 0.84
HPS3-206ENST00000486530 NDUFS3O75489 264 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 LMNAP02545 664 aaKnown RBP20.33■□□□□ 0.84
HPS3-206ENST00000486530 EZRP15311 586 aaKnown RBP20.33■□□□□ 0.84
HPS3-206ENST00000486530 GM2AP17900 193 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 KCNA5P22460 613 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 ABL2P42684 1182 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 GALNT1Q10472 559 aaPredicted RBP20.33■□□□□ 0.84
HPS3-206ENST00000486530 BBS7Q8IWZ6 715 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 TTC30BQ8N4P2 665 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 KDM1BQ8NB78 822 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 TTC16Q8NEE8 873 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 BHMTQ93088 406 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 FAR2Q96K12 515 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 EMILIN2Q9BXX0 1053 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 NUF2Q9BZD4 464 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 CYP4F12Q9HCS2 524 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 ASAH2Q9NR71 780 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 L3MBTL1Q9Y468 752 aa20.33■□□□□ 0.84
HPS3-206ENST00000486530 A0A1W2PRU2 124 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 TRPC5OSA6NMA1 111 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 H7C0S8 307 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 DCXO43602 365 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 PRSS56P0CW18 603 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 EPHB1P54762 984 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 E2F5Q15329 346 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 SH2D4BQ5SQS7 431 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 ATXN7L2Q5T6C5 722 aaPredicted RBP20.32■□□□□ 0.84
HPS3-206ENST00000486530 FRMD7Q6ZUT3 714 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 METTL3Q86U44 580 aaKnown RBP20.32■□□□□ 0.84
HPS3-206ENST00000486530 KIRREL3Q8IZU9 778 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 APCDD1Q8J025 514 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 AFAP1L2Q8N4X5 818 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 SH3RF2Q8TEC5 729 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 L3HYPDHQ96EM0 354 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 MYO19Q96H55 970 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 SMIM14Q96QK8 99 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 TRMOQ9BU70 441 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 SHCBP1LQ9BZQ2 653 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 SYTL2Q9HCH5 934 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 TAS2R13Q9NYV9 303 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 NOP53Q9NZM5 478 aaKnown RBP20.32■□□□□ 0.84
HPS3-206ENST00000486530 FKBPLQ9UIM3 349 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 LZTS1Q9Y250 596 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 IRAK3Q9Y616 596 aa20.32■□□□□ 0.84
HPS3-206ENST00000486530 GOLGA8QA0A0J9YX86 632 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 GOLGA8OA6NCC3 632 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 GOLGA8NF8WBI6 632 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 NEMP1O14524 444 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 ZBTB14O43829 449 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 SMIM24O75264 130 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 TM7SF2O76062 418 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 RHOBTB1O94844 696 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 SP100P23497 879 aaPredicted RBP20.31■□□□□ 0.84
HPS3-206ENST00000486530 MC4RP32245 332 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 CPOXP36551 454 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 MAPK8P45983 427 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 TTPAP49638 278 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 NAA25Q14CX7 972 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 LSM12Q3MHD2 195 aaKnown RBP20.31■□□□□ 0.84
HPS3-206ENST00000486530 AARS2Q5JTZ9 985 aaKnown RBP20.31■□□□□ 0.84
HPS3-206ENST00000486530 ICE2Q659A1 982 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 PHTF2Q8N3S3 785 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 ENDOVQ8N8Q3 282 aaKnown RBP20.31■□□□□ 0.84
HPS3-206ENST00000486530 RHEBL1Q8TAI7 183 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 PTERQ96BW5 349 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 TCF25Q9BQ70 676 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 WDR55Q9H6Y2 383 aaPredicted RBP20.31■□□□□ 0.84
HPS3-206ENST00000486530 GTSE1Q9NYZ3 720 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 KIAA1522Q9P206 1035 aaPredicted RBP20.31■□□□□ 0.84
HPS3-206ENST00000486530 PCDHB9Q9Y5E1 797 aa20.31■□□□□ 0.84
HPS3-206ENST00000486530 SLC22A2O15244 555 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 ENTPD5O75356 428 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 SRP72O76094 671 aaKnown RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 GLUD1P00367 558 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 MT-CO1P00395 513 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 IMPDH1P20839 514 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 EPHA3P29320 983 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 KLF10Q13118 480 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 ARMC12Q5T9G4 340 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 WLSQ5T9L3 541 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 SPNS2Q8IVW8 549 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 SCUBE1Q8IWY4 988 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 POU5F2Q8N7G0 328 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 MRPL43Q8N983 215 aaKnown RBP20.3■□□□□ 0.84
HPS3-206ENST00000486530 FIBINQ8TAL6 211 aa20.3■□□□□ 0.84
HPS3-206ENST00000486530 CORO1BQ9BR76 489 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms