RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 Q6ZVL8 140 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 TRMT10CQ7L0Y3 403 aaKnown RBP16.51■□□□□ 0.23
THBS3-207ENST00000486260 UNC5BQ8IZJ1 945 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 TBC1D3Q8IZP1 549 aaPredicted RBP16.51■□□□□ 0.23
THBS3-207ENST00000486260 TBATAQ96M53 351 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 TTC25Q96NG3 672 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 SUDS3Q9H7L9 328 aaPredicted RBP16.51■□□□□ 0.23
THBS3-207ENST00000486260 VPS37BQ9H9H4 285 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 IL1RAPL1Q9NZN1 696 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 RIMKLBQ9ULI2 386 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 FNDC3AQ9Y2H6 1198 aaKnown RBP16.51■□□□□ 0.23
THBS3-207ENST00000486260 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
THBS3-207ENST00000486260 IGLON5A6NGN9 336 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 LAMTOR5O43504 91 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 H2AFXP16104 143 aaPredicted RBP16.5■□□□□ 0.23
THBS3-207ENST00000486260 BPIP17213 487 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 ETV3P41162 512 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 SPINT3P49223 89 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 ACVR1Q04771 509 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 DMWDQ09019 674 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 SEL1L3Q68CR1 1132 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 C1orf210Q8IVY1 113 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 FAM160A2Q8N612 972 aaPredicted RBP16.5■□□□□ 0.23
THBS3-207ENST00000486260 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
THBS3-207ENST00000486260 UBLCP1Q8WVY7 318 aaPredicted RBP16.5■□□□□ 0.23
THBS3-207ENST00000486260 PEX13Q92968 403 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 HDAC10Q969S8 669 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 TOE1Q96GM8 510 aaKnown RBP16.5■□□□□ 0.23
THBS3-207ENST00000486260 CDKN2AIPNLQ96HQ2 116 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 SGK2Q9HBY8 427 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 PREBQ9HCU5 417 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 PRMT8Q9NR22 394 aaPredicted RBP16.5■□□□□ 0.23
THBS3-207ENST00000486260 PKD2L2Q9NZM6 624 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 CD84Q9UIB8 345 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 FKBPLQ9UIM3 349 aa16.5■□□□□ 0.23
THBS3-207ENST00000486260 ZFR2Q9UPR6 939 aaKnown RBP16.5■□□□□ 0.23
THBS3-207ENST00000486260 LRRK1Q38SD2 2015 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 CACNA1IQ9P0X4 2223 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 FAM86C2PA6NEL3 165 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 PSMD11O00231 422 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 AXIN1O15169 862 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 RIPK2O43353 540 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 LZTS3O60299 673 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 RNGTTO60942 597 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 RPP40O75818 363 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 VAPBO95292 243 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 PSMA3P25788 255 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 OXTRP30559 389 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 MAP7D1Q3KQU3 841 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 BEND6Q5SZJ8 279 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 TRMT10BQ6PF06 316 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 FBXO38Q6PIJ6 1188 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 TECPR1Q7Z6L1 1165 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 DTWD2Q8NBA8 298 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 GPR26Q8NDV2 337 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 UHMK1Q8TAS1 419 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 GSDMBQ8TAX9 411 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 HNRNPLLQ8WVV9 542 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 COQ10AQ96MF6 247 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 COL25A1Q9BXS0 654 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 EPB41L4BQ9H329 900 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 KDM4CQ9H3R0 1056 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 WSB2Q9NYS7 404 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 INVSQ9Y283 1065 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 SCN8AQ9UQD0 1980 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 IGHV1OR15-9A0A0B4J2B8 117 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 CCDC162PA2VCL2 907 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 OR51F1A6NGY5 319 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 GOLGA8KD6RF30 607 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 GOLGA8TH3BQL2 631 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 WNT9AO14904 365 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 RECQL5O94762 991 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 SEMA4FO95754 770 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 PAMP19021 973 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 ARNTP27540 789 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 CD6P30203 668 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 HSD17B3P37058 310 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 HADHAP40939 763 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 ARCN1P48444 511 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 PPP2CBP62714 309 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 PPP2CAP67775 309 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 PRAMEP78395 509 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 ALS2CLQ60I27 953 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 KIAA0930Q6ICG6 404 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 MAML2Q8IZL2 1156 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 OR2T34Q8NGX1 318 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 OR6P1Q8NGX9 317 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 KLK6Q92876 244 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 ZDBF2Q9HCK1 2354 aa16.49■□□□□ 0.23
THBS3-207ENST00000486260 C20orf96Q9NUD7 363 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 ARGLU1Q9NWB6 273 aaPredicted RBP16.49■□□□□ 0.23
THBS3-207ENST00000486260 TCRBV9S1A1TA0A576 114 aa16.48■□□□□ 0.23
THBS3-207ENST00000486260 LRRC72A6NJI9 287 aa16.48■□□□□ 0.23
THBS3-207ENST00000486260 TM7SF2O76062 418 aa16.48■□□□□ 0.23
THBS3-207ENST00000486260 GSTA2P09210 222 aa16.48■□□□□ 0.23
THBS3-207ENST00000486260 ERVK-10P10266 1014 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms