RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 LGR4Q9BXB1 951 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 OSBPL1AQ9BXW6 950 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 ACTL8Q9H568 366 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 FAM204AQ9H8W3 233 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 ACSS2Q9NR19 701 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 DDIT4Q9NX09 232 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 MPP6Q9NZW5 540 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 COPG2Q9UBF2 871 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 SNX10Q9Y5X0 201 aa8.25□□□□□ -1.09
XRN1-212ENST00000486211 SYNJ2BP-COX16A0A087WUM0 186 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 ILVBLA1L0T0 632 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 DRGXA6NNA5 263 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 CACNB4O00305 520 aaPredicted RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 E2F3O00716 465 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 KLRC4O43908 158 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 KIAA0754O94854 1291 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 NADKO95544 446 aaPredicted RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 POP4O95707 220 aaKnown RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 GSRP00390 522 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 SNRPB2P08579 225 aaKnown RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 CASP14P31944 242 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 TRIM23P36406 574 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 GPD2P43304 727 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 MXI1P50539 228 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 NDST2P52849 883 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 CUL4BQ13620 913 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 IL10RAQ13651 578 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 RAPGEF1Q13905 1077 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 NFIL3Q16649 462 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 SMTNL2Q2TAL5 461 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 MYLK3Q32MK0 819 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 OXLD1Q5BKU9 147 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 TMEM214Q6NUQ4 689 aaKnown RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 FAM173BQ6P4H8 233 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 GDPD4Q6W3E5 623 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 ZNF783Q6ZMS7 281 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 CDH24Q86UP0 819 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 PELI3Q8N2H9 469 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 RYBPQ8N488 228 aaPredicted RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 OR2AP1Q8NGE2 309 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 UBE2Q2Q8WVN8 375 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 INPP5DQ92835 1189 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 ARHGEF2Q92974 986 aaKnown RBP8.24□□□□□ -1.09
XRN1-212ENST00000486211 STAMBPL1Q96FJ0 436 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 SLC2A13Q96QE2 648 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 GSDMCQ9BYG8 508 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 SIK2Q9H0K1 926 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 ATP13A1Q9HD20 1204 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 FAM13BQ9NYF5 915 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 COX16Q9P0S2 106 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 TRAF3IP3Q9Y228 551 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
XRN1-212ENST00000486211 IGLV3-10A0A075B6K4 115 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 CXorf51AA0A1B0GTR3 108 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 C21orf140B9A014 251 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 E5RJQ4 531 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 KRT13P13646 458 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 BPIP17213 487 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 KELP23276 732 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 NR2F2P24468 414 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 OR1E1P30953 314 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 GARSP41250 739 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 NOP2P46087 812 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 FASLGP48023 281 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 LIG3P49916 1009 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 YWHAEP62258 255 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 RPS18P62269 152 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 CDK17Q00537 523 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 CEBPZQ03701 1054 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 FOXM1Q08050 763 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 ILF3Q12906 894 aaKnown RBP eCLIP8.23□□□□□ -1.09
XRN1-212ENST00000486211 MTA1Q13330 715 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 SLC39A14Q15043 492 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 STILQ15468 1287 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 ATXN7L2Q5T6C5 722 aaPredicted RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 OTUD1Q5VV17 481 aaPredicted RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 SLC30A9Q6PML9 568 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 TMEM270Q6UE05 265 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 DEFB106AQ8N104 65 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 OR10G6Q8NH81 332 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 SMAD5Q99717 465 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 BRD8Q9H0E9 1235 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 THAP9Q9H5L6 903 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 CARS2Q9HA77 564 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 LHX9Q9NQ69 397 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 ST7Q9NRC1 585 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 TRNAU1APQ9NX07 287 aaKnown RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 OSGIN2Q9Y236 505 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 COQ4Q9Y3A0 265 aa8.23□□□□□ -1.09
XRN1-212ENST00000486211 MN1Q10571 1320 aaPredicted RBP8.23□□□□□ -1.09
XRN1-212ENST00000486211 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 DOCK4Q8N1I0 1966 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 SSU72P8A0A1W2PR75 194 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 NDUFA10O95299 355 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 CEACAM5P06731 702 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ANKRD34CP0C6C1 535 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 DRD2P14416 443 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 COX6B1P14854 86 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms