RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CARD6Q9BX69 1037 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 CDH19Q9H159 772 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 ARRDC1-AS1Q9H2J1 176 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 XAB2Q9HCS7 855 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 TM9SF3Q9HD45 589 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 PIH1D1Q9NWS0 290 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 BFARQ9NZS9 450 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 CD84Q9UIB8 345 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 PILRBQ9UKJ0 227 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 FNDC3AQ9Y2H6 1198 aaKnown RBP11.38□□□□□ -0.59
NUP50-216ENST00000486184 SPO11Q9Y5K1 396 aa11.38□□□□□ -0.59
NUP50-216ENST00000486184 CACNA1HO95180 2353 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 HEATR9A2RTY3 570 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 RGSL1A5PLK6 1076 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 GOLGA8MH3BSY2 632 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 PPFIA2O75334 1257 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 PYGLP06737 847 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 LPOP22079 712 aaPredicted RBP11.37□□□□□ -0.59
NUP50-216ENST00000486184 CD38P28907 300 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 HMGCLP35914 325 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 MAGEA6P43360 314 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 NPY2RP49146 381 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 THOP1P52888 689 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 SESN2P58004 480 aaPredicted RBP11.37□□□□□ -0.59
NUP50-216ENST00000486184 MRPS25P82663 173 aaKnown RBP11.37□□□□□ -0.59
NUP50-216ENST00000486184 FGL2Q14314 439 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 IRF4Q15306 451 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 RNASEH2BQ5TBB1 312 aaKnown RBP11.37□□□□□ -0.59
NUP50-216ENST00000486184 ZDHHC20Q5W0Z9 365 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 RAET1GQ6H3X3 334 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 DENND5AQ6IQ26 1287 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 LRRC8BQ6P9F7 803 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 Q6ZVL8 140 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 TMC3Q7Z5M5 1100 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 NRSN1Q8IZ57 195 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 MMGT1Q8N4V1 131 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 SUMF1Q8NBK3 374 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 AP2M1Q96CW1 435 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 DTD2Q96FN9 168 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 KLHDC7BQ96G42 594 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 ERP44Q9BS26 406 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 NUSAP1Q9BXS6 441 aaKnown RBP11.37□□□□□ -0.59
NUP50-216ENST00000486184 DPH5Q9H2P9 285 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 FAM83DQ9H4H8 585 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 EBF2Q9HAK2 575 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 CASS4Q9NQ75 786 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 SAMD15Q9P1V8 674 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 RAPGEFL1Q9UHV5 662 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 ANAPC5Q9UJX4 755 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 HS3ST3A1Q9Y663 406 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
NUP50-216ENST00000486184 TCRBV7S3A2A0A539 114 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 PROB1E7EW31 1015 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TOR1BO14657 336 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 AURKAO14965 403 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 KHNYNO15037 678 aaKnown RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 RAD51BO15315 384 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TMEM63AO94886 807 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 MLNP12872 115 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TSHRP16473 764 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 ADRA1DP25100 572 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 IGFALSP35858 605 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 SPAM1P38567 509 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 HADHAP40939 763 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 GRIA1P42261 906 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 GPR1P46091 355 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 RABIFP47224 123 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 SPINT3P49223 89 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 ITGA8P53708 1063 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 CLDN2P57739 230 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 OVGP1Q12889 678 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 MTM1Q13496 603 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 MORF4L2Q15014 288 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 CDKN3Q16667 212 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 WSCD2Q2TBF2 565 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 GLE1Q53GS7 698 aaKnown RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 TRIM61Q5EBN2 209 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 CERCAMQ5T4B2 595 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 PEAR1Q5VY43 1037 aaPredicted RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 ANKRD22Q5VYY1 191 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 CASC4Q6P4E1 433 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 KYAT3Q6YP21 454 aaKnown RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 ZNF765Q7L2R6 523 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 NLRP9Q7RTR0 991 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TTC30BQ8N4P2 665 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 NAT8LQ8N9F0 302 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 MFSD2AQ8NA29 543 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TP53I13Q8NBR0 393 aaPredicted RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 MCUQ8NE86 351 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 CENPTQ96BT3 561 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 PLEKHG4BQ96PX9 1271 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 SPATA16Q9BXB7 569 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 FRMD8Q9BZ67 464 aaPredicted RBP11.36□□□□□ -0.59
NUP50-216ENST00000486184 IL22Q9GZX6 179 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 ABCG8Q9H221 673 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 BPIFA1Q9NP55 256 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 TMEM74BQ9NUR3 256 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms