RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RSPO4Q2I0M5 234 aaPredicted RBP11.83□□□□□ -0.52
HPS4-214ENST00000485842 ZNF423Q2M1K9 1284 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 RAET1GQ6H3X3 334 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 ESRP1Q6NXG1 681 aaKnown RBP11.83□□□□□ -0.52
HPS4-214ENST00000485842 TTC27Q6P3X3 843 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 TECPR1Q7Z6L1 1165 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 PELI3Q8N2H9 469 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
HPS4-214ENST00000485842 AP2M1Q96CW1 435 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 C16orf45Q96MC5 204 aaPredicted RBP11.83□□□□□ -0.52
HPS4-214ENST00000485842 ELF4Q99607 663 aaPredicted RBP11.83□□□□□ -0.52
HPS4-214ENST00000485842 LRRC40Q9H9A6 602 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 ZFYVE1Q9HBF4 777 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 ETNK1Q9HBU6 452 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 MAGEE1Q9HCI5 957 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 RAB6BQ9NRW1 208 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 DNAJC28Q9NX36 388 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 KCTD5Q9NXV2 234 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 PKD2L2Q9NZM6 624 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 PAK5Q9P286 719 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 OR1A2Q9Y585 309 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
HPS4-214ENST00000485842 MYLKQ15746 1914 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 A0A1B0GTQ1 180 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 AURKAO14965 403 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 PSMD3O43242 534 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 SDC3O75056 442 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 PHF2O75151 1096 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 TSHRP16473 764 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 ADRA1AP35348 466 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 COILP38432 576 aaPredicted RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 ARRB1P49407 418 aaPredicted RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 VPS41P49754 854 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 LIMK1P53667 647 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 TERF1P54274 439 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 ETF1P62495 437 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 BASP1P80723 227 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 FZD2Q14332 565 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 ZNF542PQ5EBM4 170 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 ALS2CLQ60I27 953 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 PNCKQ6P2M8 343 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 CCDC137Q6PK04 289 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 GLT6D1Q7Z4J2 308 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 DCP2Q8IU60 420 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 CBARPQ8N350 705 aaPredicted RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 OXR1Q8N573 874 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 SCAMP4Q969E2 229 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 SRPK1Q96SB4 655 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 APOOQ9BUR5 198 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 RIOK2Q9BVS4 552 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 ABCG8Q9H221 673 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 WDR26Q9H7D7 661 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 CAAP1Q9H8G2 361 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 GPR27Q9NS67 375 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 TM7SF3Q9NS93 570 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 DNAAF2Q9NVR5 837 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 PIH1D1Q9NWS0 290 aaKnown RBP11.82□□□□□ -0.52
HPS4-214ENST00000485842 HACD3Q9P035 362 aa11.82□□□□□ -0.52
HPS4-214ENST00000485842 ASCC3Q8N3C0 2202 aaKnown RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 SPTY2D1-AS1A0A0U1RR47 76 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 TOR1BO14657 336 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 SLC30A4O14863 429 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 BUD23O43709 281 aaKnown RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 DFNA5O60443 496 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 AP2A1O95782 977 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 KRT14P02533 472 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 EPHA8P29322 1005 aaPredicted RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 GPR1P46091 355 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 SPINT3P49223 89 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 YPEL5P62699 121 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 PTK2BQ14289 1009 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 NFATC4Q14934 902 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 CYP1B1Q16678 543 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 KCTD11Q693B1 232 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 RANBP10Q6VN20 620 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 MACC1Q6ZN28 852 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 ZNF765Q7L2R6 523 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 PARGQ86W56 976 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 HEATR4Q86WZ0 1026 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 GATAD2AQ86YP4 633 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 CREG2Q8IUH2 290 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 NRSN1Q8IZ57 195 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 TTC30BQ8N4P2 665 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 ATL2Q8NHH9 583 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 FUBP1Q96AE4 644 aaKnown RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 EID2BQ96D98 161 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 AGAP2Q99490 1192 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 FAM83DQ9H4H8 585 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 ERVMER34-1Q9H9K5 563 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 TDRD6O60522 2096 aaKnown RBP11.81□□□□□ -0.52
HPS4-214ENST00000485842 CEP250Q9BV73 2442 aa11.81□□□□□ -0.52
HPS4-214ENST00000485842 ERI2A8K979 691 aaKnown RBP11.8□□□□□ -0.52
HPS4-214ENST00000485842 YKT6O15498 198 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 GAS8O95995 478 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms