RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 RAD23BP54727 409 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 PRAMEP78395 509 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 IFI35P80217 286 aaPredicted RBP6.77□□□□□ -1.33
UBR3-210ENST00000484596 CALD1Q05682 793 aaKnown RBP6.77□□□□□ -1.33
UBR3-210ENST00000484596 DSC1Q08554 894 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 TRAF1Q13077 416 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 FRG1Q14331 258 aaKnown RBP6.77□□□□□ -1.33
UBR3-210ENST00000484596 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 SPECC1Q5M775 1068 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 ARMC3Q5W041 872 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 TTI2Q6NXR4 508 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 SARM1Q6SZW1 724 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 LCTLQ6UWM7 567 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 NOXA1Q86UR1 476 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 ARHGAP12Q8IWW6 846 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 C17orf53Q8N3J3 647 aaPredicted RBP6.77□□□□□ -1.33
UBR3-210ENST00000484596 MIGA1Q8NAN2 632 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 SGCDQ92629 289 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 PABPC5Q96DU9 382 aaKnown RBP6.77□□□□□ -1.33
UBR3-210ENST00000484596 TMEM68Q96MH6 324 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 SMARCAD1Q9H4L7 1026 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 KIF9Q9HAQ2 790 aa6.77□□□□□ -1.33
UBR3-210ENST00000484596 CLK4Q9HAZ1 481 aaKnown RBP6.77□□□□□ -1.33
UBR3-210ENST00000484596 PASKQ96RG2 1323 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 A0A1W2PRQ8 180 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 MYO1GB0I1T2 1018 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 RGS14O43566 566 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 BEST1O76090 585 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 ALPLP05186 524 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 RARGP13631 454 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 ITGAXP20702 1163 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 NIPAL4Q0D2K0 466 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 TRAF2Q12933 501 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 STK4Q13043 487 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 GPS2Q13227 327 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 MYBPC2Q14324 1141 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 CRYMQ14894 314 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 USP41Q3LFD5 358 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 SGO1Q5FBB7 561 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 SLC30A6Q6NXT4 461 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 KLHL35Q6PF15 583 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 C9orf47Q6ZRZ4 202 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 KRT74Q7RTS7 529 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 AGBL3Q8NEM8 1001 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 HUS1BQ8NHY5 278 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 WASF1Q92558 559 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 MMABQ96EY8 250 aaPredicted RBP6.76□□□□□ -1.33
UBR3-210ENST00000484596 FAM110AQ9BQ89 295 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 DCLK3Q9C098 648 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 KAT14Q9H8E8 782 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 SCPEP1Q9HB40 452 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 CISD1Q9NZ45 108 aaKnown RBP6.76□□□□□ -1.33
UBR3-210ENST00000484596 OR6C3Q9NZP0 311 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 ERVK-11Q9UQG0 969 aa6.76□□□□□ -1.33
UBR3-210ENST00000484596 FGD5Q6ZNL6 1462 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 IGHV4-28A0A0C4DH34 117 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 SNAP23O00161 211 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 ZNF182P17025 639 aaPredicted RBP6.75□□□□□ -1.33
UBR3-210ENST00000484596 DDX5P17844 614 aaKnown RBP6.75□□□□□ -1.33
UBR3-210ENST00000484596 NNMTP40261 264 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 PMS2P54278 862 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 KLHL22Q53GT1 634 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 PLEKHA7Q6IQ23 1121 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 TMEM154Q6P9G4 183 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 ZBTB2Q8N680 514 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 SLC41A2Q96JW4 573 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 TMEM47Q9BQJ4 181 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 MAK16Q9BXY0 300 aaKnown RBP6.75□□□□□ -1.33
UBR3-210ENST00000484596 TXLNGYQ9BZA5 131 aa6.75□□□□□ -1.33
UBR3-210ENST00000484596 SNAPC4Q5SXM2 1469 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 TMEM202A6NGA9 273 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 AKR1B15C9JRZ8 316 aaPredicted RBP6.74□□□□□ -1.33
UBR3-210ENST00000484596 DKC1O60832 514 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBR3-210ENST00000484596 PGM3O95394 542 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 VNN2O95498 520 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 ADRB2P07550 413 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 HOXC6P09630 235 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 GARSP41250 739 aaKnown RBP6.74□□□□□ -1.33
UBR3-210ENST00000484596 RFX5P48382 616 aaPredicted RBP6.74□□□□□ -1.33
UBR3-210ENST00000484596 AMTP48728 403 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 CTTNQ14247 550 aaKnown RBP6.74□□□□□ -1.33
UBR3-210ENST00000484596 ALG11Q2TAA5 492 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 COL28A1Q2UY09 1125 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 PLEKHS1Q5SXH7 462 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 SHFQ7M4L6 423 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 SLC35F3Q8IY50 421 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 ADGRF2Q8IZF7 708 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 AADATQ8N5Z0 425 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 CCDC191Q8NCU4 936 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 ARRDC2Q8TBH0 407 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 JAKMIP2Q96AA8 810 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 MARK4Q96L34 752 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 HARBI1Q96MB7 349 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 CMTM3Q96MX0 182 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 LRFN5Q96NI6 719 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 NCAPGQ9BPX3 1015 aa6.74□□□□□ -1.33
UBR3-210ENST00000484596 IFIH1Q9BYX4 1025 aaKnown RBP6.74□□□□□ -1.33
UBR3-210ENST00000484596 ABI3Q9P2A4 366 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms