RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SCAMP4Q969E2 229 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 RBM41Q96IZ5 413 aaKnown RBP12.27□□□□□ -0.45
MSH5-216ENST00000484309 ABCG8Q9H221 673 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 CYP4F12Q9HCS2 524 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 UBP1Q9NZI7 540 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.27□□□□□ -0.45
MSH5-216ENST00000484309 PPIL1Q9Y3C6 166 aa12.27□□□□□ -0.45
MSH5-216ENST00000484309 C1orf232A0A0U1RR37 186 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 MACROD2A1Z1Q3 448 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 GRID2IPA4D2P6 1211 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 TRABD2BA6NFA1 517 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 LMO7DNF2Z398 122 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PSMD11O00231 422 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 CASC3O15234 703 aaKnown RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 PJA2O43164 708 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 KRT37O76014 449 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 MT-CYBP00156 380 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 TNFP01375 233 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 SLC4A1P02730 911 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PIRTP0C851 137 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 MYCLP1P12525 358 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 CTNNA1P35221 906 aaKnown RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 TRIM23P36406 574 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 GPR1P46091 355 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 BLKP51451 505 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PTSQ03393 145 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 TARDBPQ13148 414 aaKnown RBP eCLIP12.26□□□□□ -0.45
MSH5-216ENST00000484309 ILKQ13418 452 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 C6orf132Q5T0Z8 1188 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 AADACL2Q6P093 401 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 EFL1Q7Z2Z2 1120 aaKnown RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 TECPR1Q7Z6L1 1165 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 TRIM74Q86UV6 250 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 NT5DC3Q86UY8 548 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 TMPRSS12Q86WS5 348 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 SFTPA2Q8IWL1 248 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 CBARPQ8N350 705 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 FSTL5Q8N475 847 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 FAM181AQ8N9Y4 354 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 KYQ8NBH2 561 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PTCD2Q8WV60 388 aaKnown RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 TFB1MQ8WVM0 346 aaKnown RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 P3H4Q92791 437 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 AP2M1Q96CW1 435 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 IMP4Q96G21 291 aaKnown RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 AGAP2Q99490 1192 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 FAM118BQ9BPY3 351 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 BOCQ9BWV1 1114 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 TMEM168Q9H0V1 697 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PHPT1Q9NRX4 125 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 IMPACTQ9P2X3 320 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 GULP1Q9UBP9 304 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PACSIN2Q9UNF0 486 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 ANKRD11Q6UB99 2663 aaPredicted RBP12.26□□□□□ -0.45
MSH5-216ENST00000484309 ASPMQ8IZT6 3477 aa12.26□□□□□ -0.45
MSH5-216ENST00000484309 PRSS38A1L453 326 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 TMEM8BA6NDV4 472 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 TPP1O14773 563 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 PMPCBO75439 489 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 SOD1P00441 154 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 ZNF30P17039 623 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 NFKB1P19838 968 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 KELP23276 732 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 POLD2P49005 469 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 NR2C2P49116 596 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 DUSP3P51452 185 aaPredicted RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 STC1P52823 247 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 CDK3Q00526 305 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 WASHC5Q12768 1159 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 ELOCQ15369 112 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 NR0B2Q15466 257 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 TEX44Q53QW1 395 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 PERM1Q5SV97 790 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 CCDC181Q5TID7 509 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 BBS12Q6ZW61 710 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 LYSMD3Q7Z3D4 306 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 GKN2Q86XP6 184 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 KDF1Q8NAX2 398 aaPredicted RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 KIAA1524Q8TCG1 905 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 MAPK15Q8TD08 544 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 TBATAQ96M53 351 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 MLPHQ9BV36 600 aaPredicted RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 RIOK2Q9BVS4 552 aaKnown RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 SLC25A51Q9H1U9 297 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 CCDC86Q9H6F5 360 aaKnown RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 SYNDIG1Q9H7V2 258 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 CARS2Q9HA77 564 aaKnown RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 GLOD4Q9HC38 313 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 KLHL8Q9P2G9 620 aaPredicted RBP12.25□□□□□ -0.45
MSH5-216ENST00000484309 GPR34Q9UPC5 381 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 PCDHA3Q9Y5H8 950 aa12.25□□□□□ -0.45
MSH5-216ENST00000484309 BTNL10A8MVZ5 291 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 GOLGA6L6A8MZA4 724 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 ANKRD66B4E2M5 251 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 H7C0C1 242 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms