RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SLC35F3Q8IY50 421 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CCDC13Q8IYE1 715 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 UBL4BQ8N7F7 174 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 OR6K2Q8NGY2 324 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 BTN2A2Q8WVV5 523 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 ECHDC3Q96DC8 303 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 KLHL32Q96NJ5 620 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 OLFM3Q96PB7 478 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 LENG8Q96PV6 779 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CCNL2Q96S94 520 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 KLF6Q99612 283 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CCDC3Q9BQI4 270 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 ARHGAP9Q9BRR9 750 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 EPB41L5Q9HCM4 733 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 GPR27Q9NS67 375 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 APOBEC3BQ9UH17 382 aaKnown RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 GGT7Q9UJ14 662 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 AMFRQ9UKV5 643 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 DOLKQ9UPQ8 538 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 ITM2BQ9Y287 266 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 DUSP10Q9Y6W6 482 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 hCG_1818297A0A087WSY0 165 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 GRID2IPA4D2P6 1211 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 INSIG1O15503 277 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 HTRA2O43464 458 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 LZTS3O60299 673 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 CCNB1P14635 433 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 CA4P22748 312 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 XPAP23025 273 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 ABL2P42684 1182 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 PEX5P50542 639 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 SCNN1BP51168 640 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 PFN3P60673 137 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 IFI35P80217 286 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 NFKB2Q00653 900 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 GBE1Q04446 702 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 XRCC4Q13426 336 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 PTK2BQ14289 1009 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 TGIF1Q15583 401 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 UGP2Q16851 508 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 ESRP1Q6NXG1 681 aaKnown RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 ERAP2Q6P179 960 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 MFSD7Q6UXD7 560 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 PEX26Q7Z412 305 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 NT5DC3Q86UY8 548 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 RFX6Q8HWS3 928 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 TP53INP2Q8IXH6 220 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 RAVER1Q8IY67 606 aaKnown RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 PHACTR4Q8IZ21 702 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 NDUFAF2Q8N183 169 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 FBXO39Q8N4B4 442 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 EXD3Q8N9H8 876 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 DENND6BQ8NEG7 585 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 P3H4Q92791 437 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 NAT6Q93015 286 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 RNF25Q96BH1 459 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-213ENST00000484112 EXOC2Q96KP1 924 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 VAT1Q99536 393 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 FERMT1Q9BQL6 677 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 BOCQ9BWV1 1114 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 C1QTNF7Q9BXJ2 289 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 SLC13A1Q9BZW2 595 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 KCTD5Q9NXV2 234 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 SIRPGQ9P1W8 387 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 PADI4Q9UM07 663 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 TFR2Q9UP52 801 aa10.03□□□□□ -0.8
CPSF4-213ENST00000484112 MACROD2A1Z1Q3 448 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 HACD1B0YJ81 288 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 APOC4-APOC2K7ER74 178 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 TRAFD1O14545 582 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 YY2O15391 372 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 EFSO43281 561 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CST8O60676 142 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 MMP20O60882 483 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 TJP3O95049 919 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 APOC2P02655 101 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CELA2BP08218 269 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 ITGA2BP08514 1039 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 TNNT1P13805 278 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 HGFP14210 728 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 TSHRP16473 764 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 SLC5A2P31639 672 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 CSRP3P50461 194 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 PDX1P52945 283 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 RPL26P61254 145 aaKnown RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 PPARDQ03181 441 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 SLC10A2Q12908 348 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 SRSF6Q13247 344 aaKnown RBP10.02□□□□□ -0.81
CPSF4-213ENST00000484112 AGERQ15109 404 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 SLC14A2Q15849 920 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 LINC00303Q3SY05 128 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 TMEM52BQ4KMG9 183 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 LRRC73Q5JTD7 316 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 BBS12Q6ZW61 710 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 RAB11FIP2Q7L804 512 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 RD3Q7Z3Z2 195 aa10.02□□□□□ -0.81
CPSF4-213ENST00000484112 B3GNT8Q7Z7M8 397 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms