RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ZNF182P17025 639 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CD72P21854 359 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 NR4A1P22736 598 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ADSSP30520 456 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SLC8A1P32418 973 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 MCM5P33992 734 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 LIPAP38571 399 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 IL15P40933 162 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 JAK3P52333 1124 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 EFNA5P52803 228 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 NAGLUP54802 743 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CASP9P55211 416 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 HSD11B2P80365 405 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CXCL9Q07325 125 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 HNRNPA0Q13151 305 aaKnown RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 DRAP1Q14919 205 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 PDK1Q15118 436 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 OASLQ15646 514 aaKnown RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 KRT24Q2M2I5 525 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ERCC6LQ2NKX8 1250 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 HFEQ30201 348 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CD300EQ496F6 205 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 FBXO43Q4G163 708 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SOWAHCQ53LP3 525 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 C6orf136Q5SQH8 315 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 TEX35Q5T0J7 233 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 DHRS7BQ6IAN0 325 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 KCNV1Q6PIU1 500 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 C15orf39Q6ZRI6 1047 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 LRRC55Q6ZSA7 311 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 C11orf57Q6ZUT1 292 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 AACSQ86V21 672 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 DZIP1Q86YF9 867 aaKnown RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ARID3BQ8IVW6 561 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 MAML2Q8IZL2 1156 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 Q8NA96 180 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 RBM15BQ8NDT2 890 aaKnown RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 GMCL1P1Q8NEA9 526 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 LPCAT1Q8NF37 534 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 OR56A1Q8NGH5 318 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 OR10S1Q8NGN2 331 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 BICD2Q8TD16 824 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SLC13A3Q8WWT9 602 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 PRCCQ92733 491 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CTHRC1Q96CG8 243 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CFAP53Q96M91 514 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ZNF830Q96NB3 372 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 PIMREGQ9BSJ6 248 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CRACR2AQ9BSW2 395 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 TPSD1Q9BZJ3 242 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ERAP1Q9NZ08 941 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 CGNQ9P2M7 1197 aaKnown RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 COPG2Q9UBF2 871 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 RABL2AQ9UBK7 228 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 FBXO40Q9UH90 709 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ZNHIT2Q9UHR6 403 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 NAP1L2Q9ULW6 460 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 RPH3AQ9Y2J0 694 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 FAM96BQ9Y3D0 163 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 PKP3Q9Y446 797 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 AATKQ6ZMQ8 1374 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ATP8B3O60423 1300 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CLRN2A0PK11 232 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 LNP1A1A4G5 178 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 C17orf100A8MU93 164 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 DIRC3C9JPN6 131 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 MCIDASD6RGH6 385 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 SLC16A3O15427 465 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CBX6O95503 412 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 C1RP00736 705 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 HIST1H2ABP04908 130 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ALPPP05187 535 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 VIMP08670 466 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ALDOCP09972 364 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ALPPL2P10696 532 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 UROSP10746 265 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 GJA1P17302 382 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 HIST1H2ADP20671 130 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 DRD4P21917 467 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 TNFRSF8P28908 595 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 PCGF2P35227 344 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ADPRHP54922 357 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 SLC37A1P57057 533 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ST8SIA6P61647 398 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 KCNJ10P78508 379 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 DEUP1Q05D60 604 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 MRPL28Q13084 256 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 RRS1Q15050 365 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 PGM5Q15124 567 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 LEXMQ3ZCV2 418 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 TIGD2Q4W5G0 525 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CEP55Q53EZ4 464 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ZNF789Q5FWF6 425 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CXorf66Q5JRM2 361 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 FAM102AQ5T9C2 384 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 TEDDM1Q5T9Z0 273 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 PLA2G4FQ68DD2 849 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms