RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PIAS2O75928 621 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 CSF2P04141 144 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 NME1P15531 152 aaKnown RBP26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 GRK6P43250 576 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 MPP3Q13368 585 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 NFATC4Q14934 902 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 SLC25A41Q8N5S1 370 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 BAHD1Q8TBE0 780 aaPredicted RBP26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 SCAMP4Q969E2 229 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 EID2BQ96D98 161 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 TCEAL2Q9H3H9 227 aaPredicted RBP26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 SPO11Q9Y5K1 396 aa26.46■■□□□ 1.83
GTF3C4-202ENST00000483873 COL5A1P20908 1838 aaPredicted RBP26.45■■□□□ 1.83
GTF3C4-202ENST00000483873 GOLGA6CA6NDK9 693 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 GOLGA6BA6NDN3 693 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 C5orf60A6NFR6 353 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 CEP104O60308 925 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 GOLGA6DP0CG33 693 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 DGKAP23743 735 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 TRIM23P36406 574 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 OLIG2Q13516 323 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 OASLQ15646 514 aaKnown RBP26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 SIRPB2Q5JXA9 342 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 KCTD16Q68DU8 428 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 RBFAQ8N0V3 343 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 SLC25A45Q8N413 288 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 LGR4Q9BXB1 951 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 KCTD5Q9NXV2 234 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 GOLGA6AQ9NYA3 693 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 ZNF711Q9Y462 761 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 JRKLQ9Y4A0 524 aa26.45■■□□□ 1.82
GTF3C4-202ENST00000483873 FGGP02679 453 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 SLC4A1P02730 911 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 JUNDP17535 347 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 GEMP55040 296 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 SNX1Q13596 522 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 CCDC70Q6NSX1 233 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 ENPP7Q6UWV6 458 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 EID2Q8N6I1 236 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 FICDQ9BVA6 458 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 WDR26Q9H7D7 661 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 MAGEE1Q9HCI5 957 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 MYLKQ15746 1914 aa26.44■■□□□ 1.82
GTF3C4-202ENST00000483873 SPEGQ15772 3267 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 MED19A0JLT2 244 aaPredicted RBP26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 ZNF189O75820 626 aaPredicted RBP26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 ANXA9O76027 345 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 SOD1P00441 154 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 ATP1A1P05023 1023 aaKnown RBP26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 TSHRP16473 764 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 KIAA1024LP59773 190 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 GNG11P61952 73 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 HNRNPKP61978 463 aaKnown RBP eCLIP26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 SLC1A5Q15758 541 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 RAET1GQ6H3X3 334 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 HEATR4Q86WZ0 1026 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 PHACTR4Q8IZ21 702 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 TSACCQ96A04 125 aaPredicted RBP26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 AP2M1Q96CW1 435 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 WDR24Q96S15 920 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 AGAP2Q99490 1192 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 FSD1LQ9BXM9 530 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 ZFYVE1Q9HBF4 777 aa26.43■■□□□ 1.82
GTF3C4-202ENST00000483873 TMEM202A6NGA9 273 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 AURKAO14965 403 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 METTL18O95568 372 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 AGTP01019 485 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 EPOP01588 193 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 SPINT3P49223 89 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 DPTQ07507 201 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 TRIP6Q15654 476 aaKnown RBP26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 ALG11Q2TAA5 492 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 INAVAQ3KP66 663 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 N4BP2L1Q5TBK1 243 aaPredicted RBP26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 ARHGEF18Q6ZSZ5 1173 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 CCHCR1Q8TD31 782 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 WDR92Q96MX6 357 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 APOL2Q9BQE5 337 aa26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 RIOK2Q9BVS4 552 aaKnown RBP26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 FRMD8P1Q9BZ68 369 aaPredicted RBP26.42■■□□□ 1.82
GTF3C4-202ENST00000483873 CACNB4O00305 520 aaPredicted RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 SCAMP1O15126 338 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 GCATO75600 419 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 MSNP26038 577 aaKnown RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 HTR1BP28222 390 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 TNNT3P45378 269 aaPredicted RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 SIM1P81133 766 aaPredicted RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 PRPSAP1Q14558 356 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 FAXCQ5TGI0 409 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 ZNF765Q7L2R6 523 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 NRSN1Q8IZ57 195 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 TAB3Q8N5C8 712 aaPredicted RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 ZNF548Q8NEK5 533 aaPredicted RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 PDXPQ96GD0 296 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 GPR63Q9BZJ6 419 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 FGF22Q9HCT0 170 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 PKD2L2Q9NZM6 624 aa26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 APOBEC3BQ9UH17 382 aaKnown RBP26.41■■□□□ 1.82
GTF3C4-202ENST00000483873 H3BM21 787 aa26.4■■□□□ 1.82
GTF3C4-202ENST00000483873 FFAR2O15552 330 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms