RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 AQP9O43315 295 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 PMPCBO75439 489 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 CLDN7O95471 211 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 SOD1P00441 154 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 ATXN1LP0C7T5 689 aaKnown RBP17.97■□□□□ 0.47
HDAC6-225ENST00000483506 MYCLP1P12525 358 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-225ENST00000483506 BLKP51451 505 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 HK3P52790 923 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 WNT3AP56704 352 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 PPARDQ03181 441 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 MPP3Q13368 585 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 RPS6KA1Q15418 735 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 ALG11Q2TAA5 492 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 DENND2CQ68D51 928 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 ITPRIPL1Q6GPH6 555 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 RAB44Q7Z6P3 723 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-225ENST00000483506 SLCO6A1Q86UG4 719 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 SLC35B2Q8TB61 432 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 ADAMTS14Q8WXS8 1223 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 CNDP2Q96KP4 475 aaKnown RBP17.97■□□□□ 0.47
HDAC6-225ENST00000483506 MRGPRX2Q96LB1 330 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 FAM118BQ9BPY3 351 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 GORASP1Q9BQQ3 440 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 LRRC61Q9BV99 259 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 DUSP23Q9BVJ7 150 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 ABCG8Q9H221 673 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 C10orf88Q9H8K7 445 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 SPASTQ9UBP0 616 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 PCDHGA1Q9Y5H4 931 aa17.97■□□□□ 0.47
HDAC6-225ENST00000483506 C1orf232A0A0U1RR37 186 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 TCRBV7S2A1N4TA0A589 114 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 ENC1O14682 589 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 TPP1O14773 563 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 RASGRP1O95267 797 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 LDOC1O95751 146 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 PYGLP06737 847 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 KELP23276 732 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 CDK3Q00526 305 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 PCSK7Q16549 785 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 ANKRD20A2Q5SQ80 823 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 SEL1L2Q5TEA6 688 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 ANKRD20A1Q5TYW2 823 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 ANKRD20A3Q5VUR7 823 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 DARS2Q6PI48 645 aaKnown RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 ADAMTSL4Q6UY14 1074 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 RFLNAQ6ZTI6 216 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 KLHDC8BQ8IXV7 354 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 RBFAQ8N0V3 343 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 FAM181AQ8N9Y4 354 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 EID2BQ96D98 161 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 LGR4Q9BXB1 951 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 FRMD8P1Q9BZ68 369 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 SLC13A1Q9BZW2 595 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 TCEAL2Q9H3H9 227 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 PHPT1Q9NRX4 125 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 UBP1Q9NZI7 540 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 NFKBIL1Q9UBC1 381 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 KLQ9UEF7 1012 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 RSPH14Q9UHP6 348 aa17.96■□□□□ 0.47
HDAC6-225ENST00000483506 R3HDM2Q9Y2K5 976 aaKnown RBP17.96■□□□□ 0.47
HDAC6-225ENST00000483506 SCN8AQ9UQD0 1980 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 GOLGA4Q13439 2230 aaKnown RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 C5orf60A6NFR6 353 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 TMEM202A6NGA9 273 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 GOLGA8CPA6NN73 597 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 LMO7DNF2Z398 122 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 PDE2AO00408 941 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 KCNN4O15554 427 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 SIGLEC6O43699 453 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 GCATO75600 419 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 STK10O94804 968 aaKnown RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 PTMAP06454 111 aaKnown RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 ALPPL2P10696 532 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 SPINT3P49223 89 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 ACADVLP49748 655 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 SRP54P61011 504 aaKnown RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 ENPP7Q6UWV6 458 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 LYSMD3Q7Z3D4 306 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 HEATR4Q86WZ0 1026 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 SLC13A5Q86YT5 568 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 SDR16C5Q8N3Y7 309 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 FSTL5Q8N475 847 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-225ENST00000483506 OR56A4Q8NGH8 313 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 CCHCR1Q8TD31 782 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 AP2M1Q96CW1 435 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 KCNF1Q9H3M0 494 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 ZFYVE1Q9HBF4 777 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 FGF22Q9HCT0 170 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 PKD2L2Q9NZM6 624 aa17.95■□□□□ 0.46
HDAC6-225ENST00000483506 FAM221BA6H8Z2 402 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 FFAR2O15552 330 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 ANXA9O76027 345 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 HLA-DPA1P20036 260 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 ACP1P24666 158 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 DCDC1P59894 354 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 FOXC1Q12948 553 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 ILKQ13418 452 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 PRRT3Q5FWE3 981 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 HENMT1Q5T8I9 393 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms