RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
CPNE1-225ENST00000483495 ARMCX1Q9P291 453 aa13.23□□□□□ -0.29
CPNE1-225ENST00000483495 ZMYM5Q9UJ78 669 aa13.23□□□□□ -0.29
CPNE1-225ENST00000483495 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
CPNE1-225ENST00000483495 HELZP42694 1942 aaKnown RBP13.22□□□□□ -0.29
CPNE1-225ENST00000483495 MATN2O00339 956 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 GRM6O15303 877 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 XYLBO75191 536 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 CSPG5O95196 566 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 IGSF6O95976 241 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 EPCAMP16422 314 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 ZNF37AP17032 561 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-225ENST00000483495 CD9P21926 228 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 HLA-FP30511 346 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 HMGCLP35914 325 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 RPL14P50914 215 aaKnown RBP13.22□□□□□ -0.29
CPNE1-225ENST00000483495 EPHB1P54762 984 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 USP4Q13107 963 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 PEX6Q13608 980 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 ISCA2Q86U28 154 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 TREML1Q86YW5 311 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 EFHBQ8N7U6 833 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 MICAL1Q8TDZ2 1067 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 VOPP1Q96AW1 172 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 TBC1D10AQ9BXI6 508 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 UNKQ9C0B0 810 aaKnown RBP13.22□□□□□ -0.29
CPNE1-225ENST00000483495 COG4Q9H9E3 785 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 NCKIPSDQ9NZQ3 722 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 EVLQ9UI08 416 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-225ENST00000483495 FKBPLQ9UIM3 349 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 MED16Q9Y2X0 877 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
CPNE1-225ENST00000483495 A8MT66 165 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 SLCO1B7G3V0H7 640 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 NDUFS3O75489 264 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 IPO13O94829 963 aaKnown RBP13.21□□□□□ -0.29
CPNE1-225ENST00000483495 PIGNO95427 931 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 HSPA1AP0DMV8 641 aaKnown RBP13.21□□□□□ -0.29
CPNE1-225ENST00000483495 HSPA1BP0DMV9 641 aaKnown RBP13.21□□□□□ -0.29
CPNE1-225ENST00000483495 CD1DP15813 335 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 AOC1P19801 751 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 MPSTP25325 297 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 MC4RP32245 332 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 TTPAP49638 278 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
CPNE1-225ENST00000483495 XIAPP98170 497 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 ZNF77Q15935 545 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 DGKKQ5KSL6 1271 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 TRIM67Q6ZTA4 783 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 SLC22A9Q8IVM8 553 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 PIANPQ8IYJ0 282 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 ZNF557Q8N988 423 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-225ENST00000483495 OR2AP1Q8NGE2 309 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 EID2BQ96D98 161 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 CNDP1Q96KN2 507 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 POMKQ9H5K3 350 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.29
CPNE1-225ENST00000483495 A0A0J9YYE9 177 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 PFDN6O15212 129 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 HDAC3O15379 428 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 PRAMEF12O95522 483 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 TRBC1P01850 177 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 SLC4A1P02730 911 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 ESRRAP11474 423 aaPredicted RBP13.21□□□□□ -0.3
CPNE1-225ENST00000483495 SRCP12931 536 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 TFEBP19484 476 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 KCNA5P22460 613 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 ALDH18A1P54886 795 aaKnown RBP13.21□□□□□ -0.3
CPNE1-225ENST00000483495 NFKB2Q00653 900 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 PTPRRQ15256 657 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 FUT11Q495W5 492 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 SETMARQ53H47 684 aaPredicted RBP13.21□□□□□ -0.3
CPNE1-225ENST00000483495 AARS2Q5JTZ9 985 aaKnown RBP13.21□□□□□ -0.3
CPNE1-225ENST00000483495 METTL21CQ5VZV1 264 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.3
CPNE1-225ENST00000483495 PSAPL1Q6NUJ1 521 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 RHEBL1Q8TAI7 183 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 IRF7Q92985 503 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 MOCOSQ96EN8 888 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 SGF29Q96ES7 293 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 BIRC8Q96P09 236 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 MIPEPQ99797 713 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 BTBD10Q9BSF8 475 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 ATP13A3Q9H7F0 1226 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 TAS2R13Q9NYV9 303 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 TBC1D14Q9P2M4 693 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 PKP3Q9Y446 797 aa13.21□□□□□ -0.3
CPNE1-225ENST00000483495 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.3
CPNE1-225ENST00000483495 NEMP2A6NFY4 417 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 F8W8V4 182 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 SYN1P17600 705 aa13.2□□□□□ -0.3
CPNE1-225ENST00000483495 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-225ENST00000483495 CCR10P46092 362 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms