RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 SCD5Q86SK9 330 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 RASAL3Q86YV0 1011 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 MYO1HQ8N1T3 1032 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 ZNF276Q8N554 614 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 MAB21L3Q8N8X9 362 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 C19orf60Q96EN9 201 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 LINGO1Q96FE5 620 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 DCUN1D1Q96GG9 259 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 TBCDQ9BTW9 1192 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 PIDD1Q9HB75 910 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 SPAG4Q9NPE6 437 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 HCSTQ9UBK5 93 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 STK39Q9UEW8 545 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 PTGDR2Q9Y5Y4 395 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 TRIP11Q15643 1979 aa9.15□□□□□ -0.95
CALD1-220ENST00000482470 TRIM38O00635 465 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 FGF1P05230 155 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 UQCRBP14927 111 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 HLA-DPA1P20036 260 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 MAGEA3P43357 314 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PPM1FP49593 454 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 SCAPQ12770 1279 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ELAVL2Q12926 359 aaKnown RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 TMED1Q13445 227 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 SQLEQ14534 574 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 POM121L1PQ3SYA9 428 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ATP6AP1LQ52LC2 224 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 SAMD4BQ5PRF9 694 aaKnown RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 TLDC1Q6P9B6 456 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 TTC33Q6PID6 262 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.14□□□□□ -0.95
CALD1-220ENST00000482470 STYXQ8WUJ0 223 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 KCNA7Q96RP8 456 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 OLFM1Q99784 485 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ASB8Q9H765 288 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PLAC1Q9HBJ0 212 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ZFP14Q9HCL3 533 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 FKBPLQ9UIM3 349 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 TLR6Q9Y2C9 796 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 CAPN14A8MX76 684 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PFDN1O60925 122 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 CAPN15O75808 1086 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 FAM58BPP0C7Q3 252 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PCNAP12004 261 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 TYMPP19971 482 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 GSTT1P30711 240 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 TUFMP49411 452 aaKnown RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 MAPK10P53779 464 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 CST9Q5W186 159 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 CYS1Q717R9 158 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 RNF145Q96MT1 663 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 MKS1Q9NXB0 559 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PRPF19Q9UMS4 504 aaKnown RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 RAI2Q9Y5P3 530 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 IQCF5A8MTL0 148 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 H3BMM5 538 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PIP5K1BO14986 540 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 SNAP91O60641 907 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 CLASP2O75122 1294 aaKnown RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 RPP40O75818 363 aaKnown RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 HIST1H2AGP0C0S8 130 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 CKBP12277 381 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 HIST1H2ADP20671 130 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 LPOP22079 712 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 KPNA1P52294 538 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 CHN2P52757 468 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ATXN7L2Q5T6C5 722 aaPredicted RBP9.14□□□□□ -0.95
CALD1-220ENST00000482470 SH2D5Q6ZV89 423 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 SPPL2CQ8IUH8 684 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 MFN1Q8IWA4 741 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 FAM126BQ8IXS8 530 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 PGAM4Q8N0Y7 254 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 SPPL2BQ8TCT7 592 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 TWIST2Q8WVJ9 160 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 VPS33AQ96AX1 596 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 HIST1H2AHQ96KK5 128 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 CDK15Q96Q40 435 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 SMIM14Q96QK8 99 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 HIST1H2AJQ99878 128 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 H2AFJQ9BTM1 129 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 ADAMTS6Q9UKP5 1117 aa9.14□□□□□ -0.95
CALD1-220ENST00000482470 C15orf38-AP3S2A0A0A6YYH1 394 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CCDC154A6NI56 674 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 E7ENX8 843 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 HAS3O00219 553 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ENPP3O14638 875 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 CA12O43570 354 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 NIPSNAP2O75323 286 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 NDST3O95803 873 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 GABRB3P28472 473 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 NRG1Q02297 640 aaPredicted RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 ACAP2Q15057 778 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 TRIP4Q15650 581 aaPredicted RBP9.13□□□□□ -0.95
CALD1-220ENST00000482470 PM20D1Q6GTS8 502 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 ZFP1Q6P2D0 407 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 C17orf99Q6UX52 265 aa9.13□□□□□ -0.95
CALD1-220ENST00000482470 KIAA0408Q6ZU52 694 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms