RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ZNF140P52738 457 aaPredicted RBP20.7■□□□□ 0.9
VPS16-207ENST00000481812 DCDC1P59894 354 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 SGCGQ13326 291 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 ACOX1Q15067 660 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 SETMARQ53H47 684 aaPredicted RBP20.7■□□□□ 0.9
VPS16-207ENST00000481812 SEL1L3Q68CR1 1132 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 CEP128Q6ZU80 1094 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 LPCAT2Q7L5N7 544 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 CCNJLQ8IV13 435 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 DENND6BQ8NEG7 585 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 DTD2Q96FN9 168 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 ANKZF1Q9H8Y5 726 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 SYBUQ9NX95 663 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 MTRF1LQ9UGC7 380 aaKnown RBP20.7■□□□□ 0.9
VPS16-207ENST00000481812 SOX13Q9UN79 622 aa20.7■□□□□ 0.9
VPS16-207ENST00000481812 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.7■□□□□ 0.9
VPS16-207ENST00000481812 A0A0U1RQS6 177 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 FAM237BA0A1B0GVD1 139 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 PRR23AA6NEV1 266 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 CARSP49589 748 aaKnown RBP20.69■□□□□ 0.9
VPS16-207ENST00000481812 ACVR1Q04771 509 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 DPTQ07507 201 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 FGL2Q14314 439 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 SKIDA1Q1XH10 827 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 PLK5Q496M5 336 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 TSTD2Q5T7W7 516 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 PMS2CLQ68D20 193 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 ZC3H14Q6PJT7 736 aaKnown RBP20.69■□□□□ 0.9
VPS16-207ENST00000481812 Q6ZVL8 140 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 CENPUQ71F23 418 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 IFT81Q8WYA0 676 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.69■□□□□ 0.9
VPS16-207ENST00000481812 BIRC7Q96CA5 298 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 PLEKHG4BQ96PX9 1271 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 IRF2BPLQ9H1B7 796 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 NLE1Q9NVX2 485 aaPredicted RBP20.69■□□□□ 0.9
VPS16-207ENST00000481812 SAMD15Q9P1V8 674 aa20.69■□□□□ 0.9
VPS16-207ENST00000481812 CACNA1HO95180 2353 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 A0A1W2PPC4 97 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 H7C0S8 307 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 RHOBTB1O94844 696 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 FSBPO95073 299 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 PAK4O96013 591 aaPredicted RBP20.68■□□□□ 0.9
VPS16-207ENST00000481812 ECHS1P30084 290 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 DHX9Q08211 1270 aaKnown RBP20.68■□□□□ 0.9
VPS16-207ENST00000481812 SEPT6Q14141 434 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 HLTFQ14527 1009 aaKnown RBP eCLIP20.68■□□□□ 0.9
VPS16-207ENST00000481812 MSS51Q4VC12 460 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 DENND2CQ68D51 928 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 TMEM135Q86UB9 458 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 SLC41A1Q8IVJ1 513 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 AGGF1Q8N302 714 aaeCLIP20.68■□□□□ 0.9
VPS16-207ENST00000481812 OR4K2Q8NGD2 314 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 DNASE2BQ8WZ79 361 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 EBNA1BP2Q99848 306 aaKnown RBP20.68■□□□□ 0.9
VPS16-207ENST00000481812 COQ6Q9Y2Z9 468 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 TEX264Q9Y6I9 313 aa20.68■□□□□ 0.9
VPS16-207ENST00000481812 TNRC6BQ9UPQ9 1833 aaKnown RBP20.68■□□□□ 0.9
VPS16-207ENST00000481812 PYGLP06737 847 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 TUBBP07437 444 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 BPIP17213 487 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 HNRNPA2B1P22626 353 aaKnown RBP20.67■□□□□ 0.9
VPS16-207ENST00000481812 CD27P26842 260 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 TEAD1P28347 426 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 ETV3P41162 512 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 CRADDP78560 199 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 SRSF5Q13243 272 aaKnown RBP20.67■□□□□ 0.9
VPS16-207ENST00000481812 ELF2Q15723 593 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 BBS9Q3SYG4 887 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 CCDC38Q502W7 563 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 CEP68Q76N32 757 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 MPP5Q8N3R9 675 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 GPR161Q8N6U8 529 aaKnown RBP20.67■□□□□ 0.9
VPS16-207ENST00000481812 TP53I13Q8NBR0 393 aaPredicted RBP20.67■□□□□ 0.9
VPS16-207ENST00000481812 FAM174AQ8TBP5 190 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 CENPTQ96BT3 561 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 NUS1Q96E22 293 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 STAMBPL1Q96FJ0 436 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 PWWP2AQ96N64 755 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 FMO2Q99518 471 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 KLF6Q99612 283 aaPredicted RBP20.67■□□□□ 0.9
VPS16-207ENST00000481812 ABCG8Q9H221 673 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 FAM83DQ9H4H8 585 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 CHRAC1Q9NRG0 131 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 TREX1Q9NSU2 369 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 APPL1Q9UKG1 709 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 KCTD3Q9Y597 815 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 HS3ST3A1Q9Y663 406 aa20.67■□□□□ 0.9
VPS16-207ENST00000481812 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 PRAMEF26H0Y7S4 382 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 USP1O94782 785 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 TTC4O95801 387 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 MAT2AP31153 395 aaKnown RBP20.66■□□□□ 0.9
VPS16-207ENST00000481812 AKT2P31751 481 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 SPAM1P38567 509 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 PDIA2Q13087 525 aaKnown RBP20.66■□□□□ 0.9
VPS16-207ENST00000481812 LRRC14Q15048 493 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 ERCC6LQ2NKX8 1250 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 WDR45BQ5MNZ6 344 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 HENMT1Q5T8I9 393 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms