RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SLC41A2Q96JW4 573 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 C1orf74Q96LT6 269 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 CMTM3Q96MX0 182 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 LRFN5Q96NI6 719 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 TMX4Q9H1E5 349 aaPredicted RBP3.89□□□□□ -1.79
CBX3-207ENST00000481300 SMARCAD1Q9H4L7 1026 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 SLC28A3Q9HAS3 691 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 RANGRFQ9HD47 186 aaPredicted RBP3.89□□□□□ -1.79
CBX3-207ENST00000481300 ABI3Q9P2A4 366 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 CNOT8Q9UFF9 292 aaKnown RBP3.89□□□□□ -1.79
CBX3-207ENST00000481300 VPS28Q9UK41 221 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 CDC14AQ9UNH5 594 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 STON1Q9Y6Q2 735 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 EFCAB5A4FU69 1503 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 UGGT2Q9NYU1 1516 aa3.89□□□□□ -1.79
CBX3-207ENST00000481300 A6NCN8 305 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 ZIC3O60481 467 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 CH25HO95992 272 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 HOXC6P09630 235 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 ALOX12P18054 663 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 PCYT1AP49585 367 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 MXI1P50539 228 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 RAD23BP54727 409 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 LINC00205P59089 165 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 TRAF2Q12933 501 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 NAB2Q15742 525 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 C2orf68Q2NKX9 166 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 GGNBP1Q5YKI7 109 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 FAM205BPQ63HN1 556 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 METTL2BQ6P1Q9 378 aaKnown RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 TMED8Q6PL24 325 aaPredicted RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 CRELD2Q6UXH1 353 aaPredicted RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 MTSS1LQ765P7 747 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 FJX1Q86VR8 437 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 ZC3HC1Q86WB0 502 aaKnown RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 TICAM1Q8IUC6 712 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 WDTC1Q8N5D0 677 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 C1orf131Q8NDD1 294 aaKnown RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 ZKSCAN4Q969J2 545 aaPredicted RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 METTL2AQ96IZ6 378 aaKnown RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 KXD1Q9BQD3 176 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 C1QTNF5Q9BXJ0 243 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 MKKSQ9NPJ1 570 aaPredicted RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 HINT3Q9NQE9 182 aaKnown RBP3.88□□□□□ -1.79
CBX3-207ENST00000481300 SWAP70Q9UH65 585 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 GPR34Q9UPC5 381 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 SESN1Q9Y6P5 492 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 DISP1Q96F81 1524 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 IQGAP2Q13576 1575 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 CEP170Q5SW79 1584 aa3.88□□□□□ -1.79
CBX3-207ENST00000481300 DYTNA2CJ06 578 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 J3KR12 359 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 WNT9BO14905 357 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 SCAMP1O15126 338 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 VILLO15195 856 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 INSIG1O15503 277 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 HSPA12AO43301 675 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 TSPAN9O75954 239 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 GFPT2O94808 682 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 PRSS2P07478 247 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 CYC1P08574 325 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 CLTBP09497 229 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 G6PDP11413 515 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 TMEM11P17152 192 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 MCM3P25205 808 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 HNRNPH1P31943 449 aaKnown RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 STX2P32856 288 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 EIF2S3P41091 472 aaKnown RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 METAP2P50579 478 aaKnown RBP eCLIP3.87□□□□□ -1.79
CBX3-207ENST00000481300 CDH8P55286 799 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 ABATP80404 500 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 TFAP4Q01664 338 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 MC1RQ01726 317 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 LRMPQ12912 555 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 HLFQ16534 295 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 MEA1Q16626 185 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 TDRD12Q587J7 1177 aaKnown RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 RILPL1Q5EBL4 403 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 PPP6R3Q5H9R7 873 aaPredicted RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 EFHC1Q5JVL4 640 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 HIST2H2BCQ6DN03 193 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 HIST2H2BDQ6DRA6 164 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 SIGIRRQ6IA17 410 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 CFAP161Q6P656 301 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 CLEC4GQ6UXB4 293 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 B3GNT6Q6ZMB0 384 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 GLDNQ6ZMI3 551 aaPredicted RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 SAMD14Q8IZD0 417 aaPredicted RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 FBXL14Q8N1E6 418 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 SPATA6LQ8N4H0 392 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 RRNAD1Q96FB5 475 aaKnown RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 NTPCRQ9BSD7 190 aaKnown RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 SLC25A33Q9BSK2 321 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 PCGF1Q9BSM1 259 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 MAK16Q9BXY0 300 aaKnown RBP3.87□□□□□ -1.79
CBX3-207ENST00000481300 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 GHITMQ9H3K2 345 aa3.87□□□□□ -1.79
CBX3-207ENST00000481300 PPP1R3EQ9H7J1 279 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms