RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TECPR1Q7Z6L1 1165 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 C11orf74Q86VG3 221 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 NLRP8Q86W28 1048 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 LONP2Q86WA8 852 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 CCDC25Q86WR0 208 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 GSPT2Q8IYD1 628 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 NRSN1Q8IZ57 195 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 PYROXD1Q8WU10 500 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 TOE1Q96GM8 510 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 DNAJC1Q96KC8 554 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 C1QTNF2Q9BXJ5 285 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 PLAC1Q9HBJ0 212 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 CHRAC1Q9NRG0 131 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 ZC3H7BQ9UGR2 993 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 ZFR2Q9UPR6 939 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 PKP3Q9Y446 797 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 MAD1L1Q9Y6D9 718 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 DOCK9Q9BZ29 2069 aa12.53□□□□□ -0.4
TRAPPC12-218ENST00000479897 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.4
TRAPPC12-218ENST00000479897 ZCWPW2A0A1B0GU75 182 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 WNT9AO14904 365 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 RNGTTO60942 597 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 RPP40O75818 363 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 TM7SF2O76062 418 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 PCDH8O95206 1070 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM153BP0C7A2 387 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 BPIP17213 487 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 PAMP19021 973 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 SPAM1P38567 509 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 PXNP49023 591 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 PPP2CBP62714 309 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 PPP2CAP67775 309 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 SEMG2Q02383 582 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 DPTQ07507 201 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 DMWDQ09019 674 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 BRD3Q15059 726 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM153CQ494X1 144 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 MAP9Q49MG5 647 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 ANKRD20A4Q4UJ75 823 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 DENND2CQ68D51 928 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 SLC36A4Q6YBV0 504 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 CYS1Q717R9 158 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 HSD11B1LQ7Z5J1 315 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM124AQ86V42 546 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 CADM4Q8NFZ8 388 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 OR4K2Q8NGD2 314 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 OR13C4Q8NGS5 318 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZNF669Q96BR6 464 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 MFSD3Q96ES6 412 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZNF778Q96MU6 729 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 WRAP53Q9BUR4 548 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 C1QTNF1Q9BXJ1 281 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 FUT8Q9BYC5 575 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 CDC42EP4Q9H3Q1 356 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 APPL1Q9UKG1 709 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 KCTD3Q9Y597 815 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3DA0A087WVF3 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3IA0A087WXS9 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3EA0A087X179 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3KA0A087X1G2 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 A0A0U1RQS6 177 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 A0A1W2PQU0 124 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 FAM86C2PA6NEL3 165 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3FA6NER0 549 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3LB9A6J9 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 GAPDHSO14556 408 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 MMP20O60882 483 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ERLIN1O75477 346 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 RECQL5O94762 991 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ABHD2P08910 425 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3HP0C7X1 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ARNTP27540 789 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 NMBRP28336 390 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TEAD1P28347 426 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ETV3P41162 512 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ARCN1P48444 511 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 XIAPP98170 497 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ACOX1Q15067 660 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ZNF284Q2VY69 593 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 SPDYCQ5MJ68 293 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 HENMT1Q5T8I9 393 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 SEL1L3Q68CR1 1132 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 KIAA0895LQ68EN5 471 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 PDPK2PQ6A1A2 396 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3GQ6DHY5 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TBC1D3CQ6IPX1 549 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 TSSK4Q6SA08 328 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 UNC5AQ6ZN44 842 aa12.51□□□□□ -0.41
TRAPPC12-218ENST00000479897 Q6ZVL8 140 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms