RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 LRRC66Q68CR7 880 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 CNSTQ6PJW8 725 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 SH2D5Q6ZV89 423 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 ZC3HC1Q86WB0 502 aaKnown RBP11.21□□□□□ -0.62
APTX-223ENST00000479656 CILP2Q8IUL8 1156 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 MMAAQ8IVH4 418 aaKnown RBP11.21□□□□□ -0.62
APTX-223ENST00000479656 DCLK2Q8N568 766 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 ACVR1CQ8NER5 493 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 GABPB2Q8TAK5 448 aaPredicted RBP11.21□□□□□ -0.62
APTX-223ENST00000479656 FAM96AQ9H5X1 160 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 PCDH12Q9NPG4 1184 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 CATSPERZQ9NTU4 200 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 SENP1Q9P0U3 644 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 ADAM21Q9UKJ8 722 aa11.21□□□□□ -0.62
APTX-223ENST00000479656 TMEM120BA0PK00 339 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 PLK4O00444 970 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 S1PR4O95977 384 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 LEPRP48357 1165 aaKnown RBP11.2□□□□□ -0.62
APTX-223ENST00000479656 XIAPP98170 497 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 GRSF1Q12849 480 aaKnown RBP eCLIP11.2□□□□□ -0.62
APTX-223ENST00000479656 TDGQ13569 410 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 SLC44A4Q53GD3 710 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 FASTKD1Q53R41 847 aaKnown RBP11.2□□□□□ -0.62
APTX-223ENST00000479656 AFTPHQ6ULP2 937 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 TIFABQ6ZNK6 161 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 PARS2Q7L3T8 475 aaKnown RBP11.2□□□□□ -0.62
APTX-223ENST00000479656 ARFGAP2Q8N6H7 521 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 GPR150Q8NGU9 434 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 ARRDC3Q96B67 414 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 VPS39Q96JC1 886 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 RHOJQ9H4E5 214 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 CAB39LQ9H9S4 337 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 MYO10Q9HD67 2058 aa11.2□□□□□ -0.62
APTX-223ENST00000479656 LOC730098B7Z3J9 87 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 H7C0S8 307 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 TPP1O14773 563 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 ALDOAP04075 364 aaKnown RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 CYP2A6P11509 494 aaPredicted RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 SRFP11831 508 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 BPIP17213 487 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SAT1P21673 171 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 DRD1P21728 446 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 CD72P21854 359 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 VIPR1P32241 457 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 FOXN2P32314 431 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 CD151P48509 253 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PFKPQ01813 784 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 DNAJC3Q13217 504 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PUS10Q3MIT2 529 aaKnown RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 ZRANB3Q5FWF4 1079 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 TTC19Q6DKK2 380 aaPredicted RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 FBXL19Q6PCT2 694 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 RFLNAQ6ZTI6 216 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 KIAA0408Q6ZU52 694 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SDCCAG8Q86SQ7 713 aaPredicted RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 LMNTD2Q8IXW0 634 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 ANKRD42Q8N9B4 389 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 FAM50BQ9Y247 325 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 COL4A2P08572 1712 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SHISA7A6NL88 538 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 NPC1O15118 1278 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 TYROBPO43914 113 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SYNCRIPO60506 623 aaKnown RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 C1SP09871 688 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 GLULP15104 373 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 CHN1P15882 459 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 ITGB7P26010 798 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PMLP29590 882 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 TYK2P29597 1187 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 NTSR1P30989 418 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PSMD8P48556 350 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PGGT1BP53609 377 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 CAMK2GQ13555 558 aaPredicted RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 ARHGEF7Q14155 803 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 E2F5Q15329 346 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SDE2Q6IQ49 451 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 FAM151BQ6UXP7 276 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 CMC1Q7Z7K0 106 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 DSG4Q86SJ6 1040 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 BANPQ8N9N5 519 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 GPR26Q8NDV2 337 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 MGARPQ8TDB4 240 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 FAM3CQ92520 227 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SLC13A1Q9BZW2 595 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 IL26Q9NPH9 171 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SLC2A4RGQ9NR83 387 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SLC39A10Q9ULF5 831 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 SLC30A1Q9Y6M5 507 aa11.19□□□□□ -0.62
APTX-223ENST00000479656 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
APTX-223ENST00000479656 BPTFQ12830 3046 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms