RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 NOD2Q9HC29 1040 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 HACD3Q9P035 362 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PHTF1Q9UMS5 762 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SPTA1P02549 2419 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 A0A0J9YYE9 177 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 FAM187AA6NFU0 413 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 CAPN8A6NHC0 703 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 C16orf96A6NNT2 1141 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 PDE2AO00408 941 aaPredicted RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 KCNN4O15554 427 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 SPINT1O43278 529 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 LDOC1O95751 146 aaPredicted RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 NDST3O95803 873 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 TRBC1P01850 177 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 MLNP12872 115 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 ACP1P24666 158 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DEKP35659 375 aaKnown RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 GDF10P55107 478 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 C21orf59P57076 290 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DCDC1P59894 354 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 IL9RQ01113 521 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 NIPAL4Q0D2K0 466 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DNAJC3Q13217 504 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 IHHQ14623 411 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 ACCSLQ4AC99 568 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 GLE1Q53GS7 698 aaKnown RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 ATXN7L2Q5T6C5 722 aaPredicted RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 ZDHHC20Q5W0Z9 365 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 NAPEPLDQ6IQ20 393 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 TTC27Q6P3X3 843 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 ARHGEF18Q6ZSZ5 1173 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DPPA4Q7L190 304 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 ZNF765Q7L2R6 523 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 PARS2Q7L3T8 475 aaKnown RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 LINC00523Q86TU6 105 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 NDUFAF2Q8N183 169 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 CHST14Q8NCH0 376 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 MCUQ8NE86 351 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 OR14C36Q8NHC7 312 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 PTCD2Q8WV60 388 aaKnown RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 ATG4AQ8WYN0 398 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 MAGOHBQ96A72 148 aaKnown RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 SKA1Q96BD8 255 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 SERAC1Q96JX3 654 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 TMEM121Q9BTD3 319 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 NRSN2Q9GZP1 204 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 PRORYQ9H606 182 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 MAGEE1Q9HCI5 957 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 NT5MQ9NPB1 228 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DYRK4Q9NR20 520 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 GDF3Q9NR23 364 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 GPR27Q9NS67 375 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 KLHL8Q9P2G9 620 aaPredicted RBP8.93□□□□□ -0.98
DDX56-211ENST00000479602 FTSJ1Q9UET6 329 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 ZNF148Q9UQR1 794 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DMTF1Q9Y222 760 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 SSUH2Q9Y2M2 353 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 RAI2Q9Y5P3 530 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 FADS3Q9Y5Q0 445 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 DOCK9Q9BZ29 2069 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 AHCTF1Q8WYP5 2266 aa8.93□□□□□ -0.98
DDX56-211ENST00000479602 PIEZO2Q9H5I5 2752 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 SCN8AQ9UQD0 1980 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3DA0A087WVF3 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3IA0A087WXS9 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3EA0A087X179 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3KA0A087X1G2 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3FA6NER0 549 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 FAM47DPA6NHR8 397 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 ANKRD66B4E2M5 251 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3LB9A6J9 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PLK4O00444 970 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 ZNF185O15231 689 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TLX3O43711 291 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 LZTS3O60299 673 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 NEBLO76041 1014 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 MAP3K6O95382 1288 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 ECEL1O95672 775 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CPP00450 1065 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 IL1BP01584 269 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 UGT2B4P06133 528 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PYGLP06737 847 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TBC1D3HP0C7X1 549 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CKMT2P17540 419 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 NFKB1P19838 968 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 EIF2S3P41091 472 aaKnown RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 MAGEA3P43357 314 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 PSMD8P48556 350 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 SCNN1BP51168 640 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 DNA2P51530 1060 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CLDN6P56747 220 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 DSC2Q02487 901 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CDK18Q07002 472 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 CNTN1Q12860 1018 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TRAF2Q12933 501 aa8.92□□□□□ -0.98
DDX56-211ENST00000479602 TARDBPQ13148 414 aaKnown RBP eCLIP8.92□□□□□ -0.98
DDX56-211ENST00000479602 MSLNQ13421 630 aaPredicted RBP8.92□□□□□ -0.98
DDX56-211ENST00000479602 PRPSAP1Q14558 356 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms