RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 KCNC1P48547 511 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PHEXP78562 749 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 GSTM4Q03013 218 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PM20D1Q6GTS8 502 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 GDF6Q6KF10 455 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PKN3Q6P5Z2 889 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CD300LGQ6UXG3 332 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 NCCRP1Q6ZVX7 275 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ZC3H7AQ8IWR0 971 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 SH3RF2Q8TEC5 729 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 BORCS5Q969J3 196 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 VPS50Q96JG6 964 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 DOK1Q99704 481 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 MPP6Q9NZW5 540 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 NR5A2O00482 541 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CLOCKO15516 846 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 OR4Q2P0C623 313 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 MTHFD1P11586 935 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 MATN1P21941 496 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 APLP1P51693 650 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 MLLT10P55197 1068 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 GNA12Q03113 381 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 FAM83EQ2M2I3 478 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 TECRLQ5HYJ1 363 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 INTS11Q5TA45 600 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 DENND5AQ6IQ26 1287 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 LARP4Q71RC2 724 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ANKRD49Q8WVL7 239 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PTBP2Q9UKA9 531 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ZFC3H1O60293 1989 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PMPCBO75439 489 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 IPO13O94829 963 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CELF2O95319 508 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CAPN3P20807 821 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 LHX1P48742 406 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 HCAR3P49019 387 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CCT8P50990 548 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 DNAJB13P59910 316 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 TRAF2Q12933 501 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 UPP1Q16831 310 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 UGT3A2Q3SY77 523 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 SDHAF4Q5VUM1 108 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 C16orf87Q6PH81 154 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PDZD4Q76G19 769 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CNTN4Q8IWV2 1026 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 SLC15A3Q8IY34 581 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 SLC15A4Q8N697 577 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 TNIP2Q8NFZ5 429 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 SLC35B4Q969S0 331 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 ACDQ96AP0 544 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 PGAP3Q96FM1 320 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 GPATCH1Q9BRR8 931 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 SLC39A8Q9C0K1 460 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 CMTM6Q9NX76 183 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 TRAF6Q9Y4K3 522 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 FADS3Q9Y5Q0 445 aa13.32□□□□□ -0.28
PDZRN3-208ENST00000479530 FXYD1O00168 92 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 ZNF189O75820 626 aaPredicted RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 SNAP29O95721 258 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 MOCS2O96007 188 aaPredicted RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 HSPA8P11142 646 aaKnown RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 GPX3P22352 226 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 CPT1AP50416 773 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 CDH13P55290 713 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 MRPS6P82932 125 aaKnown RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 ATP6AP1Q15904 470 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 ARL13BQ3SXY8 428 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 CYBRD1Q53TN4 286 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 NAPEPLDQ6IQ20 393 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 DDHD1Q8NEL9 900 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 HDAC10Q969S8 669 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 FICDQ9BVA6 458 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 PDCD11Q14690 1871 aaKnown RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 A0A0J9YYE9 177 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 CPB1P15086 417 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 NCK1P16333 377 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 PCID2Q5JVF3 399 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 IFNEQ86WN2 208 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 ADGRG5Q8IZF4 528 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 MAGEE2Q8TD90 523 aaPredicted RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 SMARCD1Q96GM5 515 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 TRNAU1APQ9NX07 287 aaKnown RBP13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 NSMCE4AQ9NXX6 385 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 TRHDEQ9UKU6 1024 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 CDH9Q9ULB4 789 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 V9GYQ6 96 aa13.31□□□□□ -0.28
PDZRN3-208ENST00000479530 CCL22O00626 93 aa13.3□□□□□ -0.28
PDZRN3-208ENST00000479530 PAGE1O75459 146 aa13.3□□□□□ -0.28
PDZRN3-208ENST00000479530 KCNH1O95259 989 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms