RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 EIF2B5Q13144 721 aaKnown RBP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 PRPSAP1Q14558 356 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 P3H1Q32P28 736 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 PPM1JQ5JR12 505 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 ADAMTSL4Q6UY14 1074 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 RHBDD1Q8TEB9 315 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 LRRC45Q96CN5 670 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 OXNAD1Q96HP4 312 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 PBKQ96KB5 322 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 ZFYVE1Q9HBF4 777 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 KCND1Q9NSA2 647 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 PKD2L2Q9NZM6 624 aa15.45■□□□□ 0.06
C9orf3-217ENST00000479161 DRG1Q9Y295 367 aaKnown RBP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 R3HDM2Q9Y2K5 976 aaKnown RBP15.45■□□□□ 0.06
C9orf3-217ENST00000479161 C1orf232A0A0U1RR37 186 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 GOLGA6CA6NDK9 693 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 GOLGA6BA6NDN3 693 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 A8MX80 341 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 CACNB4O00305 520 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 SCAMP1O15126 338 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 PSMD3O43242 534 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 TNFSF14O43557 240 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 KIF5CO60282 957 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 PPFIA2O75334 1257 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 PMPCBO75439 489 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 DKK1O94907 266 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 TRIM16O95361 564 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 CLDN7O95471 211 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 C1SP09871 688 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 ATXN1LP0C7T5 689 aaKnown RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 GOLGA6DP0CG33 693 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 CDK4P11802 303 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 MYCLP1P12525 358 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 ADRA1AP35348 466 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 HMGCLP35914 325 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 ETV3P41162 512 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 SEMG2Q02383 582 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 SIX1Q15475 284 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 TRIP6Q15654 476 aaKnown RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 SLC1A5Q15758 541 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 ZDHHC20Q5W0Z9 365 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 PDPK2PQ6A1A2 396 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 LVRNQ6Q4G3 990 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 C4orf22Q6V702 233 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 SLC25A45Q8N413 288 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 RASGEF1CQ8N431 466 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 FAM181AQ8N9Y4 354 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 PLA2G15Q8NCC3 412 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 DEFB124Q8NES8 71 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 FUBP1Q96AE4 644 aaKnown RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 WDR92Q96MX6 357 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 DUSP23Q9BVJ7 150 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 ABCG8Q9H221 673 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 WDR26Q9H7D7 661 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 PHPT1Q9NRX4 125 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-217ENST00000479161 GOLGA6AQ9NYA3 693 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 NCOR2Q9Y618 2525 aa15.44■□□□□ 0.06
C9orf3-217ENST00000479161 ERI2A8K979 691 aaKnown RBP15.43■□□□□ 0.06
C9orf3-217ENST00000479161 JUNDP17535 347 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 HK3P52790 923 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 PPARDQ03181 441 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 BNIP3Q12983 259 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 GALNT3Q14435 633 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 PRAMEF14Q5SWL7 426 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 TPRG1LQ5T0D9 272 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 HENMT1Q5T8I9 393 aaKnown RBP15.43■□□□□ 0.06
C9orf3-217ENST00000479161 KCTD11Q693B1 232 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 PSAPL1Q6NUJ1 521 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 FSTL5Q8N475 847 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-217ENST00000479161 FAM71DQ8N9W8 422 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 OR4C6Q8NH72 309 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 SETD7Q8WTS6 366 aaKnown RBP15.43■□□□□ 0.06
C9orf3-217ENST00000479161 AP2M1Q96CW1 435 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 SCARF2Q96GP6 870 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-217ENST00000479161 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-217ENST00000479161 GORASP1Q9BQQ3 440 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 FSD1LQ9BXM9 530 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 DNAJC28Q9NX36 388 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 NLGN3Q9NZ94 848 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 NCKIPSDQ9NZQ3 722 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 SPASTQ9UBP0 616 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 KLF15Q9UIH9 416 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 PCDHGA1Q9Y5H4 931 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 SCN8AQ9UQD0 1980 aa15.43■□□□□ 0.06
C9orf3-217ENST00000479161 LMO7DNF2Z398 122 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 RASGRP1O95267 797 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 SOD1P00441 154 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 FGGP02679 453 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 PCCBP05166 539 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 ADRB1P08588 477 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 GIMD1P0DJR0 217 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 ALPPL2P10696 532 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 CDK3Q00526 305 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 PTPRRQ15256 657 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 PCSK7Q16549 785 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 SIRPB2Q5JXA9 342 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 ARHGEF18Q6ZSZ5 1173 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 PHACTR4Q8IZ21 702 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms