RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 AP2A1O95782 977 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 PAFAH1B1P43034 410 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 CHRNA4P43681 627 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 CLDN2P57739 230 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 HLA-BQ31612 363 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 FAXCQ5TGI0 409 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 SLC25A41Q8N5S1 370 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 DTD2Q96FN9 168 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 KLHDC7BQ96G42 594 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 C16orf45Q96MC5 204 aaPredicted RBP26.77■■□□□ 1.88
CCM2-211ENST00000478582 TBL1YQ9BQ87 522 aa26.77■■□□□ 1.88
CCM2-211ENST00000478582 MBNL1Q9NR56 388 aaKnown RBP26.77■■□□□ 1.88
CCM2-211ENST00000478582 A0A0U1RQS6 177 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 C1orf232A0A0U1RR37 186 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 POM121BA6NF01 834 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 H0Y8X5 98 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 C1SP09871 688 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 ZSCAN5DPP0CG00 497 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 ZNF883P0CG24 379 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 IGFALSP35858 605 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 C21orf59P57076 290 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 PFN3P60673 137 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 SEMA5AQ13591 1074 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 IRF4Q15306 451 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 KIF19Q2TAC6 998 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 LAYNQ6UX15 382 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 TMC3Q7Z5M5 1100 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 NLRP8Q86W28 1048 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 NRSN1Q8IZ57 195 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 PDCD7Q8N8D1 485 aaKnown RBP26.76■■□□□ 1.87
CCM2-211ENST00000478582 CCHCR1Q8TD31 782 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 TRABDQ9H4I3 376 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 ZFYVE1Q9HBF4 777 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 GPR27Q9NS67 375 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 HACD3Q9P035 362 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 SPO11Q9Y5K1 396 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 LRRK1Q38SD2 2015 aa26.76■■□□□ 1.87
CCM2-211ENST00000478582 KNL1Q8NG31 2342 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 RGSL1A5PLK6 1076 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 PMLP29590 882 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 ETV3P41162 512 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 CTSKP43235 329 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 RABIFP47224 123 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 NXPH1P58417 271 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 DENND2CQ68D51 928 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 DENND5AQ6IQ26 1287 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 Q6ZVL8 140 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 LYSMD3Q7Z3D4 306 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 DCP2Q8IU60 420 aaKnown RBP26.75■■□□□ 1.87
CCM2-211ENST00000478582 GRK7Q8WTQ7 553 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 NUS1Q96E22 293 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 IL21RQ9HBE5 538 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 RAB6BQ9NRW1 208 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 NEU2Q9Y3R4 380 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 ZNF711Q9Y462 761 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 SNX11Q9Y5W9 270 aa26.75■■□□□ 1.87
CCM2-211ENST00000478582 PDE2AO00408 941 aaPredicted RBP26.74■■□□□ 1.87
CCM2-211ENST00000478582 SUN1O94901 812 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 PIRTP0C851 137 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 THEGLP0DJG4 465 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 YPEL5P62699 121 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 DPTQ07507 201 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 MSLNQ13421 630 aaPredicted RBP26.74■■□□□ 1.87
CCM2-211ENST00000478582 MTM1Q13496 603 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 OLIG2Q13516 323 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 SPARCL1Q14515 664 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 ESRP1Q6NXG1 681 aaKnown RBP26.74■■□□□ 1.87
CCM2-211ENST00000478582 Q6ZSR6 202 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 ZNF765Q7L2R6 523 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 OR13H1Q8NG92 308 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 EID2BQ96D98 161 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 TM7SF3Q9NS93 570 aa26.74■■□□□ 1.87
CCM2-211ENST00000478582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.73■■□□□ 1.87
CCM2-211ENST00000478582 KIF2AO00139 706 aaPredicted RBP26.73■■□□□ 1.87
CCM2-211ENST00000478582 SH3BP5O60239 455 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 KRT14P02533 472 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 SPINT3P49223 89 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 LINC00523Q86TU6 105 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 TAB3Q8N5C8 712 aaPredicted RBP26.73■■□□□ 1.87
CCM2-211ENST00000478582 SLCO2A1Q92959 643 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 APOL2Q9BQE5 337 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 GPR63Q9BZJ6 419 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 ERVMER34-1Q9H9K5 563 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 PKD2L2Q9NZM6 624 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 PCYOX1Q9UHG3 505 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 SHOC2Q9UQ13 582 aa26.73■■□□□ 1.87
CCM2-211ENST00000478582 FNDC3AQ9Y2H6 1198 aaKnown RBP26.73■■□□□ 1.87
CCM2-211ENST00000478582 CCDC188H7C350 402 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 USP12O75317 370 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 TEAD1P28347 426 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 TRIM23P36406 574 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 INPP5AQ14642 412 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 PNCKQ6P2M8 343 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 SPATS2Q86XZ4 545 aaKnown RBP26.72■■□□□ 1.87
CCM2-211ENST00000478582 TTC30BQ8N4P2 665 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 ABCG8Q9H221 673 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 GDF3Q9NR23 364 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 EIF2B3Q9NR50 452 aaKnown RBP26.72■■□□□ 1.87
CCM2-211ENST00000478582 PCDHGB2Q9Y5G2 931 aa26.72■■□□□ 1.87
CCM2-211ENST00000478582 E7EVH7 732 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms