RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ADGRF5Q8IZF2 1346 aa4.21□□□□□ -1.73
CDC42BPA-212ENST00000478573 YTHDC2Q9H6S0 1430 aaKnown RBP4.21□□□□□ -1.73
CDC42BPA-212ENST00000478573 BRWD3Q6RI45 1802 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 ACOT8O14734 319 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 PAPSS2O95340 614 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 SPARCP09486 303 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 UNGP13051 313 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 PTPN2P17706 415 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 ALOX12P18054 663 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 KLRC2P26717 231 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 SLC16A2P36021 539 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 OLR1P78380 273 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 LTBQ06643 244 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 PMPCAQ10713 525 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 TAF11Q15544 211 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 EDRF1Q3B7T1 1238 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 ALG10Q5BKT4 473 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 ALG10BQ5I7T1 473 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 NCEH1Q6PIU2 408 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 KLHL24Q6TFL4 600 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 C16orf54Q6UWD8 224 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 MOB3CQ70IA8 216 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 CCDC25Q86WR0 208 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 TMC8Q8IU68 726 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 ZDHHC23Q8IYP9 409 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 FAM185AQ8N0U4 392 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 CNTROBQ8N137 903 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 SLC25A41Q8N5S1 370 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 CCDC89Q8N998 374 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 CADM4Q8NFZ8 388 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 FAM149B1Q96BN6 582 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 INTS12Q96CB8 462 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 MAP7D2Q96T17 732 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 SDF4Q9BRK5 362 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 PRKRIP1Q9H875 184 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 EIF2B3Q9NR50 452 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 HCFC1R1Q9NWW0 138 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 LIMA1Q9UHB6 759 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 A4GNTQ9UNA3 340 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 RABGAP1Q9Y3P9 1069 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 KCNE2Q9Y6J6 123 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 JCADQ9P266 1359 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 C1orf167Q5SNV9 1468 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 PXDNQ92626 1479 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 DOCK7Q96N67 2140 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 LRP6O75581 1613 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 ANKARQ7Z5J8 1434 aa4.21□□□□□ -1.74
CDC42BPA-212ENST00000478573 COL14A1Q05707 1796 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 FAM208AQ9UK61 1670 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 EIF3AQ14152 1382 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 ABCC11Q96J66 1382 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 DISP3Q9P2K9 1392 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 A0A1W2PRG0 241 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 C17orf102A2RUQ5 167 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 LIPT2A6NK58 231 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 TTC36A6NLP5 189 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 KRT86O43790 486 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 PAGE4O60829 102 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 HOXB5P09067 269 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 IRF1P10914 325 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 SLC2A4P14672 509 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 MT3P25713 68 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 POU1F1P28069 291 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 HSPA1LP34931 641 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 DPP6P42658 865 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 TMEM115Q12893 351 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 KRT81Q14533 505 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 RNPS1Q15287 305 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 CCDC129Q6ZRS4 1044 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 TRILQ7L0X0 811 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 INPP5DQ92835 1189 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 H2AFJQ9BTM1 129 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 HEMGNQ9BXL5 484 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 GLIS2Q9BZE0 524 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 CCDC68Q9H2F9 335 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 TASP1Q9H6P5 420 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 SYNCQ9H7C4 482 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 SCPEP1Q9HB40 452 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 PNRC2Q9NPJ4 139 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 HIF1ANQ9NWT6 349 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 CLIC5Q9NZA1 410 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 TBC1D29Q9UFV1 150 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 VPS28Q9UK41 221 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 INTS6Q9UL03 887 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 CAPN7Q9Y6W3 813 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 KIF20BQ96Q89 1820 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 ANKRD26Q9UPS8 1709 aa4.2□□□□□ -1.74
CDC42BPA-212ENST00000478573 LTN1O94822 1766 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 ATP7BP35670 1465 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 CDK12Q9NYV4 1490 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 A0A1W2PQF6 199 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 DYTNA2CJ06 578 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 AGAP14A8MT82 685 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 BCAT2O15382 392 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 TIMM44O43615 452 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 EIF2S1P05198 315 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 MYZAPP0CAP1 466 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 CTPS1P17812 591 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 TTKP33981 857 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 RYKP34925 604 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms