RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RHOJQ9H4E5 214 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 MRM3Q9HC36 420 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CSNK1G1Q9HCP0 422 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 C20orf96Q9NUD7 363 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 NMRK1Q9NWW6 199 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 DONSONQ9NYP3 566 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ACTR10Q9NZ32 417 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 TMEM216Q9P0N5 145 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 SLC17A6Q9P2U8 582 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 DSEQ9UL01 958 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 CORO1CQ9ULV4 474 aaPredicted RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 AAR2Q9Y312 384 aaKnown RBP4.99□□□□□ -1.61
SF3B6-202ENST00000478050 PSAT1Q9Y617 370 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 GREB1Q4ZG55 1949 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 ACACBO00763 2458 aa4.99□□□□□ -1.61
SF3B6-202ENST00000478050 FAM208BQ5VWN6 2430 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 FAM186AA6NE01 2351 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 RIF1Q5UIP0 2472 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 hCG_2014768A0A024R1R8 64 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GOLGA8QA0A0J9YX86 632 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GOLGA8OA6NCC3 632 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GOLGA8NF8WBI6 632 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SLCO1B7G3V0H7 640 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF195O14628 629 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SLC22A2O15244 555 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CCNT2O60583 730 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF623O75123 536 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 USP12O75317 370 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 DUSP11O75319 330 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TBX10O75333 385 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CABYRO75952 493 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 LRIG2O94898 1065 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SNUPNO95149 360 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 HSPA4LO95757 839 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 JCHAINP01591 159 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 IGLV3-25P01717 112 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 C2P06681 752 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 AKR1A1P14550 325 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ANPEPP15144 967 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CCNCP24863 283 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ADSLP30566 484 aaPredicted RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 HOXC13P31276 330 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CPOXP36551 454 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CSRP3P50461 194 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CLCNKBP51801 687 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 KPNA2P52292 529 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GEMP55040 296 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SESN3P58005 492 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 BEX3Q00994 111 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TSPY1Q01534 308 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 BTKQ06187 659 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ZBTB17Q13105 803 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GSTA3Q16772 222 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 HSP90AA5PQ58FG0 334 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PPM1JQ5JR12 505 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PCID2Q5JVF3 399 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 MAP3K21Q5TCX8 1036 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 C1orf146Q5VVC0 180 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 LIPMQ5VYY2 423 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 METTL21CQ5VZV1 264 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TRIM68Q6AZZ1 485 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ANO7Q6IWH7 933 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 FSTL4Q6MZW2 842 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TIGD7Q6NT04 549 aaPredicted RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 EPGNQ6UW88 154 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CES3Q6UWW8 571 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ZYG11AQ6WRX3 759 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GPRIN1Q7Z2K8 1008 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 MAVSQ7Z434 540 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CMC1Q7Z7K0 106 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SETD3Q86TU7 594 aaPredicted RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TAC4Q86UU9 113 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 LRRC49Q8IUZ0 686 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SULF2Q8IWU5 870 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CNTN4Q8IWV2 1026 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 THEM5Q8N1Q8 247 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ATPAF2Q8N5M1 289 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 NPWQ8N729 165 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CELF2-AS1Q8N7Q2 184 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 NETO2Q8NC67 525 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GSTCDQ8NEC7 633 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PPHLN1Q8NEY8 458 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GABPB2Q8TAK5 448 aaPredicted RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ACTRT2Q8TDY3 377 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 MICAL1Q8TDZ2 1067 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 DQX1Q8TE96 717 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PPP1R13LQ8WUF5 828 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 VPS39Q96JC1 886 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 UROC1Q96N76 676 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ALPK1Q96QP1 1244 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PANX3Q96QZ0 392 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 FCRL5Q96RD9 977 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 HAPLN3Q96S86 360 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 IL12RB2Q99665 862 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 GPR22Q99680 433 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 APBA2Q99767 749 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PTPN18Q99952 460 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TBL1YQ9BQ87 522 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms