RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 UCMAQ8WVF2 138 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 TWIST2Q8WVJ9 160 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 CENPIQ92674 756 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-220ENST00000477528 MYO19Q96H55 970 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 C1orf21Q9H246 121 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 ZDHHC6Q9H6R6 413 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 A0A087WXM4 84 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 DHRS12A0PJE2 317 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 NPEPPSL1A6NEC2 478 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 SLC22A3O75751 556 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 OAS1P00973 400 aaKnown RBP14.62□□□□□ -0.07
HDAC6-220ENST00000477528 AHSGP02765 367 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 WEE1P30291 646 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 NPAS4Q8IUM7 802 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 GPR21Q99679 349 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 UNC93B1Q9H1C4 597 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 PCDHB1Q9Y5F3 818 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 FAM72CH0Y354 149 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 TOP3BO95985 862 aaKnown RBP14.62□□□□□ -0.07
HDAC6-220ENST00000477528 PCNAP12004 261 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 INPP1P49441 399 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 ACLYP53396 1101 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 LCP2Q13094 533 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 DMC1Q14565 340 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 PPM1LQ5SGD2 360 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 FAM72AQ5TYM5 149 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 CLEC6AQ6EIG7 209 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 FAM72DQ6L9T8 149 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 FAM72BQ86X60 149 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 EID3Q8N140 333 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 SELENOMQ8WWX9 145 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 C1orf50Q9BV19 199 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 OSBPL11Q9BXB4 747 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 SCML2Q9UQR0 700 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 SMIM31A0A1B0GVY4 71 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 RPL5P46777 297 aaKnown RBP14.62□□□□□ -0.07
HDAC6-220ENST00000477528 SLC10A7Q0GE19 358 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 DPYSQ14117 519 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 STEAP4Q687X5 459 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 NAIF1Q69YI7 327 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-220ENST00000477528 UPF1Q92900 1129 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC6-220ENST00000477528 INVSQ9Y283 1065 aa14.62□□□□□ -0.07
HDAC6-220ENST00000477528 M0R3G1 203 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 TBX10O75333 385 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 SMNDC1O75940 238 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■■□□□ 12.9
HDAC6-220ENST00000477528 RAP1GDS1P52306 607 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 HSPA14Q0VDF9 509 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 SCAPQ12770 1279 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 DEFB115Q30KQ5 88 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 FAM151BQ6UXP7 276 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 RRM2BQ7LG56 351 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 ADCK1Q86TW2 530 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 ZDHHC13Q8IUH4 622 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 C8orf48Q96LL4 319 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 GRIP2Q9C0E4 1043 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 NKX1-2Q9UD57 310 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-220ENST00000477528 SLC38A8A6NNN8 435 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 SLC28A1O00337 649 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 PFKMP08237 780 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 TNK2Q07912 1038 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 CAMK2GQ13555 558 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-220ENST00000477528 IRF5Q13568 498 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 UPP1Q16831 310 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 FBXL22Q6P050 247 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 MSANTD2Q6P1R3 559 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 CERS6Q6ZMG9 384 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 ZNF276Q8N554 614 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 MFSD1Q9H3U5 465 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 SNX6Q9UNH7 406 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 ALDOAP04075 364 aaKnown RBP14.61□□□□□ -0.07
HDAC6-220ENST00000477528 CLCQ05315 142 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 HERC3Q15034 1050 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 MAPKAPK3Q16644 382 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 AMIGO2Q86SJ2 522 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 PLD4Q96BZ4 506 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 MED8Q96G25 268 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 TSGA13Q96PP4 275 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 ZCCHC2Q9C0B9 1178 aaKnown RBP14.61□□□□□ -0.07
HDAC6-220ENST00000477528 CAPN8A6NHC0 703 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 SOCS7O14512 581 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 FGF3P11487 239 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-220ENST00000477528 ZNF599Q96NL3 588 aa14.61□□□□□ -0.07
HDAC6-220ENST00000477528 INTS10Q9NVR2 710 aaKnown RBP14.61□□□□□ -0.07
HDAC6-220ENST00000477528 MYH9P35579 1960 aaKnown RBP14.6□□□□□ -0.07
HDAC6-220ENST00000477528 FFAR3O14843 346 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 GPR42O15529 346 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 TBX18O95935 607 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 F7P08709 466 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-220ENST00000477528 RPL38P63173 70 aaKnown RBP14.6□□□□□ -0.07
HDAC6-220ENST00000477528 PLD3Q8IV08 490 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 TMEM40Q8WWA1 233 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 MPP4Q96JB8 637 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 MRPS26Q9BYN8 205 aaKnown RBP14.6□□□□□ -0.07
HDAC6-220ENST00000477528 DPP7Q9UHL4 492 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 ZNF510Q9Y2H8 683 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 DYTNA2CJ06 578 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 KPNA5O15131 536 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 REP15Q6BDI9 236 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 EPGNQ6UW88 154 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 ZFYVE1Q9HBF4 777 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms