RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 OPTCQ9UBM4 332 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 GNG14A0A1W2PPG7 69 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 PTGES3LE9PB15 166 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 KPNA3O00505 521 aaPredicted RBP11.02□□□□□ -0.64
COL27A1-204ENST00000477421 TP73O15350 636 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 DNAJA2O60884 412 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 NDST3O95803 873 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 CHRNA1P02708 482 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 CES1P23141 567 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 GSTT1P30711 240 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 SQLEQ14534 574 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 CRY1Q16526 586 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 METTL21CQ5VZV1 264 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 CPNE9Q8IYJ1 553 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 TTC9BQ8N6N2 239 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 CNTD1Q8N815 330 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 FAM120BQ96EK7 910 aaKnown RBP11.02□□□□□ -0.64
COL27A1-204ENST00000477421 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.64
COL27A1-204ENST00000477421 POLG2Q9UHN1 485 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 NRAPQ86VF7 1730 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 NUP205Q92621 2012 aa11.02□□□□□ -0.64
COL27A1-204ENST00000477421 H3BMM5 538 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 AURKAO14965 403 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 DCLK1O15075 740 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 LRATO95237 230 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 LYNP07948 512 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 GABRR2P28476 465 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 ETV4P43268 484 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 PFKPQ01813 784 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 UPP1Q16831 310 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 PAQR3Q6TCH7 311 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 NAT16Q8N8M0 369 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF555Q8NEP9 628 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 TRIB2Q92519 343 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 VPS33AQ96AX1 596 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 MPP4Q96JB8 637 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 SH3BP4Q9P0V3 963 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 LZTS1Q9Y250 596 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 KLF11O14901 512 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 LDLRP01130 860 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF865P0CJ78 1059 aaPredicted RBP11.02□□□□□ -0.65
COL27A1-204ENST00000477421 SOAT1P35610 550 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 TTPAP49638 278 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 CHN2P52757 468 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 UBXN11Q5T124 520 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 UTP4Q969X6 686 aaKnown RBP11.02□□□□□ -0.65
COL27A1-204ENST00000477421 RMND5BQ96G75 393 aaPredicted RBP11.02□□□□□ -0.65
COL27A1-204ENST00000477421 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 CDK15Q96Q40 435 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 HAPLN3Q96S86 360 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 TSPAN18Q96SJ8 248 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 SPATA16Q9BXB7 569 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.65
COL27A1-204ENST00000477421 PSMD13Q9UNM6 376 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 NHSQ6T4R5 1651 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 ADAMTSL1Q8N6G6 1762 aa11.02□□□□□ -0.65
COL27A1-204ENST00000477421 A0A0D9SEW6 157 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 OR6C75A6NL08 312 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ADCY6O43306 1168 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 RPP40O75818 363 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SORBS2O94875 1100 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PKMP14618 531 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 HSPA13P48723 471 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ECT2LQ008S8 904 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 LPIN1Q14693 890 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 GCNT7Q6ZNI0 430 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 GPRIN3Q6ZVF9 776 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 C11orf74Q86VG3 221 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SPNS2Q8IVW8 549 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 NKAPQ8N5F7 415 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 TWIST2Q8WVJ9 160 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 HIPK3Q9H422 1215 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PIP5K1BO14986 540 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ZSCAN9O15535 394 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 TBC1D4O60343 1298 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ACSL4O60488 711 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SNAP91O60641 907 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 NIPSNAP2O75323 286 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 TNFAIP8O95379 198 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 OAS1P00973 400 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 COL6A2P12110 1019 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ITGAXP20702 1163 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 AP5B1Q2VPB7 878 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 AFTPHQ6ULP2 937 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 CENPLQ8N0S6 344 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 UPF1Q92900 1129 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SUSD3Q96L08 255 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 TRIM8Q9BZR9 551 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 C20orf27Q9GZN8 174 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 MTF2Q9Y483 593 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 TLL2Q9Y6L7 1015 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 GJA1P17302 382 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms