RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 VPS41P49754 854 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 MAXP61244 160 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ST8SIA6P61647 398 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ITKQ08881 620 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 DHX34Q14147 1143 aaKnown RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 DLG2Q15700 870 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 P3H1Q32P28 736 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ATXN7L2Q5T6C5 722 aaPredicted RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 C8orf74Q6P047 294 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 C22orf39Q6P5X5 142 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 NCEH1Q6PIU2 408 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ARHGEF18Q6ZSZ5 1173 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 PID1Q7Z2X4 250 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 JAMLQ86YT9 394 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 BBS5Q8N3I7 341 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ZNF366Q8N895 744 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 OR2T34Q8NGX1 318 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 TEKT5Q96M29 485 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 SLC46A1Q96NT5 459 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 PSKH2Q96QS6 385 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 CCNL2Q96S94 520 aaPredicted RBP11.62□□□□□ -0.55
LSM2-212ENST00000477182 VAT1Q99536 393 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 TM6SF2Q9BZW4 377 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 TNKS2Q9H2K2 1166 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 MTG2Q9H4K7 406 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 PCDH9Q9HC56 1237 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 PRSS16Q9NQE7 514 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 SUN2Q9UH99 717 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 TRHDEQ9UKU6 1024 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 ATP8A1Q9Y2Q0 1164 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 NEU2Q9Y3R4 380 aa11.62□□□□□ -0.55
LSM2-212ENST00000477182 TLN1Q9Y490 2541 aaKnown RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 TTC24A2A3L6 582 aaPredicted RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 SIGLEC6O43699 453 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 BNIP3LO60238 219 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 ZNF821O75541 412 aaPredicted RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 GP1BAP07359 652 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 NFKB1P19838 968 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 PSMB4P28070 264 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 CCR5P51681 352 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 NFKB2Q00653 900 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 DSC2Q02487 901 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 TLE1Q04724 770 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 PTK6Q13882 451 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 LINC00303Q3SY05 128 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 FAXCQ5TGI0 409 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 ITPRIPL1Q6GPH6 555 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 Q6ZVU0 165 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 SYDE1Q6ZW31 735 aaPredicted RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 MAATS1Q7Z4T9 603 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 MFSD2AQ8NA29 543 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 FRS2Q8WU20 508 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 ISG20Q96AZ6 181 aaKnown RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 SERAC1Q96JX3 654 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 MGME1Q9BQP7 344 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 LRRC1Q9BTT6 524 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 CEP44Q9C0F1 390 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 ABCG4Q9H172 646 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 GBA3Q9H227 469 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 PABPC3Q9H361 631 aaKnown RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 EBF2Q9HAK2 575 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 GLOD4Q9HC38 313 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 EVA1BQ9NVM1 165 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 FBXL12Q9NXK8 326 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 PAK5Q9P286 719 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 ASIC3Q9UHC3 531 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 BSNQ9UPA5 3926 aa11.61□□□□□ -0.55
LSM2-212ENST00000477182 USP9YO00507 2555 aaPredicted RBP11.61□□□□□ -0.55
LSM2-212ENST00000477182 FAM187AA6NFU0 413 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
LSM2-212ENST00000477182 IGSF6O95976 241 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 CKMT1AP12532 417 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 ITGB6P18564 788 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 HSPA9P38646 679 aaKnown RBP11.6□□□□□ -0.55
LSM2-212ENST00000477182 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
LSM2-212ENST00000477182 TERF1P54274 439 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 SLC7A5Q01650 507 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 NIPAL4Q0D2K0 466 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 OVGP1Q12889 678 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 GPS1Q13098 491 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 USP53Q70EK8 1073 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 IQCHQ86VS3 1027 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
LSM2-212ENST00000477182 PCDH20Q8N6Y1 951 aaKnown RBP11.6□□□□□ -0.55
LSM2-212ENST00000477182 KDM1BQ8NB78 822 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 OR6K2Q8NGY2 324 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 OR4C6Q8NH72 309 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 GDAP1L1Q96MZ0 367 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 TRIM31Q9BZY9 425 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 POLR1EQ9GZS1 481 aaKnown RBP11.6□□□□□ -0.55
LSM2-212ENST00000477182 HAUS2Q9NVX0 235 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 KCNK4Q9NYG8 393 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 FZD4Q9ULV1 537 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 SATB2Q9UPW6 733 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 PCDHGA8Q9Y5G5 932 aa11.6□□□□□ -0.55
LSM2-212ENST00000477182 EDDM13A0A1B0GTR0 161 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms