RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TTC19Q6DKK2 380 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-211ENST00000476772 RALGPS2Q86X27 583 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-211ENST00000476772 CNPY4Q8N129 248 aa28.82■■■□□ 2.2
VEGFA-211ENST00000476772 ACVR1CQ8NER5 493 aa28.82■■■□□ 2.2
VEGFA-211ENST00000476772 HCAR2Q8TDS4 363 aa28.82■■■□□ 2.2
VEGFA-211ENST00000476772 ALKBH8Q96BT7 664 aaKnown RBP28.82■■■□□ 2.2
VEGFA-211ENST00000476772 SUN2Q9UH99 717 aa28.82■■■□□ 2.2
VEGFA-211ENST00000476772 PPM1HQ9ULR3 514 aa28.82■■■□□ 2.2
VEGFA-211ENST00000476772 FAM47DPA6NHR8 397 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 C16orf96A6NNT2 1141 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 RRP9O43818 475 aaKnown RBP28.81■■■□□ 2.2
VEGFA-211ENST00000476772 FOXN2P32314 431 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 MDH1P40925 334 aaKnown RBP28.81■■■□□ 2.2
VEGFA-211ENST00000476772 CCNFP41002 786 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 WASP42768 502 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 KIR2DL1P43626 348 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-211ENST00000476772 LEPRP48357 1165 aaKnown RBP28.81■■■□□ 2.2
VEGFA-211ENST00000476772 PON2Q15165 354 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 MRNIPQ6NTE8 343 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 CNSTQ6PJW8 725 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 PARS2Q7L3T8 475 aaKnown RBP28.81■■■□□ 2.2
VEGFA-211ENST00000476772 CHPFQ8IZ52 775 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 TMIEQ8NEW7 156 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 PIP4K2CQ8TBX8 421 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 ERLEC1Q96DZ1 483 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 GPR22Q99680 433 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 PRSS16Q9NQE7 514 aa28.81■■■□□ 2.2
VEGFA-211ENST00000476772 NARSO43776 548 aaKnown RBP28.8■■■□□ 2.2
VEGFA-211ENST00000476772 METAP1P53582 386 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 ENPP2Q13822 863 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 FASTKD1Q53R41 847 aaKnown RBP28.8■■■□□ 2.2
VEGFA-211ENST00000476772 IER5LQ5T953 404 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 PTCRAQ6ISU1 281 aaPredicted RBP28.8■■■□□ 2.2
VEGFA-211ENST00000476772 GALNT7Q86SF2 657 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 MGARPQ8TDB4 240 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 SGSM3Q96HU1 749 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 C8orf33Q9H7E9 229 aaPredicted RBP28.8■■■□□ 2.2
VEGFA-211ENST00000476772 PCMTD2Q9NV79 361 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 S1PR4O95977 384 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 OGNP20774 298 aaKnown RBP28.8■■■□□ 2.2
VEGFA-211ENST00000476772 TIE1P35590 1138 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 XIAPP98170 497 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 CMC1Q7Z7K0 106 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 TTC7BQ86TV6 843 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 ISL2Q96A47 359 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 APOPT1Q96IL0 206 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 CAPS2Q9BXY5 557 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 CAB39LQ9H9S4 337 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 PCDH12Q9NPG4 1184 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 SNX15Q9NRS6 342 aa28.8■■■□□ 2.2
VEGFA-211ENST00000476772 ZNF106Q9H2Y7 1883 aaKnown RBP28.79■■■□□ 2.2
VEGFA-211ENST00000476772 EGFP01133 1207 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 RPA3P35244 121 aaPredicted RBP28.79■■■□□ 2.2
VEGFA-211ENST00000476772 SERPINB8P50452 374 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 ARRDC3Q96B67 414 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 C19orf43Q9BQ61 176 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 MLXIPLQ9NP71 852 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 NKIRAS1Q9NYS0 192 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 SLC39A10Q9ULF5 831 aa28.79■■■□□ 2.2
VEGFA-211ENST00000476772 PRUNE2Q8WUY3 3088 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 IL1BP01584 269 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 CYP2A6P11509 494 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-211ENST00000476772 BPIP17213 487 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 XPAP23025 273 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-211ENST00000476772 TYK2P29597 1187 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 VIPR1P32241 457 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 MAGEA12P43365 314 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 CDKN1CP49918 316 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-211ENST00000476772 PTSQ03393 145 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 TYSND1Q2T9J0 566 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 SDCCAG8Q86SQ7 713 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-211ENST00000476772 ACMSDQ8TDX5 336 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 PBXIP1Q96AQ6 731 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 FAM96AQ9H5X1 160 aa28.78■■■□□ 2.2
VEGFA-211ENST00000476772 INTS9Q9NV88 658 aaKnown RBP28.78■■■□□ 2.2
VEGFA-211ENST00000476772 MYO10Q9HD67 2058 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 FAM95CA0A1B0GW59 222 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 NPC1O15118 1278 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 C1SP09871 688 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 CHRM1P11229 460 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-211ENST00000476772 ITGB7P26010 798 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 STC1P52823 247 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 SLC18A1P54219 525 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 LRRC14Q15048 493 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 ZRANB3Q5FWF4 1079 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 TMEM196Q5HYL7 178 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 PSAPL1Q6NUJ1 521 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 MMAAQ8IVH4 418 aaKnown RBP28.77■■■□□ 2.2
VEGFA-211ENST00000476772 SLC13A1Q9BZW2 595 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 GAPDHSO14556 408 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-211ENST00000476772 COPEO14579 308 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 IL9P15248 144 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 NFKBIAP25963 317 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 PMLP29590 882 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 NEK3P51956 506 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 PDE1CQ14123 709 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-211ENST00000476772 E2F5Q15329 346 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 FAM151BQ6UXP7 276 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 DSG4Q86SJ6 1040 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 SLC41A1Q8IVJ1 513 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms