RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GKN1Q9NS71 199 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TSC22D4Q9Y3Q8 395 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ZBTB42B2RXF5 422 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TRAFD1O14545 582 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 EI24O14681 340 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PIP5K1BO14986 540 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ATP6V1G1O75348 118 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CD4P01730 458 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GBAP04062 536 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 IL7RP16871 459 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 NOS2P35228 1153 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ACVRL1P37023 503 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 IDH2P48735 452 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RAB27AP51159 221 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RAB10P61026 200 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RPS24P62847 133 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RPL38P63173 70 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DEFB103AP81534 67 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CDKL1Q00532 357 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SNX17Q15036 470 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CTXN3Q4LDR2 81 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 KYAT3Q6YP21 454 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CLEC20AQ6ZU45 233 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM26Q6ZUK4 368 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 C14orf80Q86SX3 495 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 IFNLR1Q8IU57 520 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FBXO39Q8N4B4 442 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 OR4K2Q8NGD2 314 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DQX1Q8TE96 717 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GIPC3Q8TF64 312 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SOCS4Q8WXH5 440 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 BADQ92934 168 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 MCRS1Q96EZ8 462 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF670Q9BS34 389 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SPATA16Q9BXB7 569 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SLC39A8Q9C0K1 460 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TLE6Q9H808 572 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RRN3Q9NYV6 651 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 WWOXQ9NZC7 414 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DNAJB4Q9UDY4 337 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CDC14AQ9UNH5 594 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PCDHB9Q9Y5E1 797 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SNX5Q9Y5X3 404 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SPTBP11277 2137 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ARFGEF1Q9Y6D6 1849 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 LOC400499M0QZD8 3231 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 KPNA5O15131 536 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FFAR2O15552 330 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 NIPSNAP2O75323 286 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GLP2RO95838 553 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 EIF2B2P49770 351 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ENTPD1P49961 510 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CDK7P50613 346 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DMPKQ09013 629 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DUSP4Q13115 394 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DYNC1I2Q13409 638 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TRIM25Q14258 630 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 AAK1Q2M2I8 961 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TCTN1Q2MV58 587 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TIGD5Q53EQ6 642 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TEX44Q53QW1 395 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SPDYCQ5MJ68 293 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GRTP1Q5TC63 336 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FOXB2Q5VYV0 432 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 KLHDC10Q6PID8 442 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 C15orf39Q6ZRI6 1047 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ADCK2Q7Z695 626 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CLIP4Q8N3C7 705 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 UBR7Q8N806 425 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TXNDC5Q8NBS9 432 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PXYLP1Q8TE99 480 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HMCESQ96FZ2 354 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RBBP8Q99708 897 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SLC29A1Q99808 456 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FEM1AQ9BSK4 669 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HGH1Q9BTY7 390 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 KATNBL1Q9H079 304 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CYP3A43Q9HB55 503 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TRNAU1APQ9NX07 287 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PRKAG2Q9UGJ0 569 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 VPS28Q9UK41 221 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 OAZ3Q9UMX2 235 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF451Q9Y4E5 1061 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TRAF6Q9Y4K3 522 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SLC30A1Q9Y6M5 507 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HNRNPCL1O60812 293 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 DLGAP3O95886 979 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CHRNA1P02708 482 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 HLA-DQB2P05538 268 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 IGFBP4P22692 258 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 XPAP23025 273 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SOAT1P35610 550 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CDKN1CP49918 316 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CPT1AP50416 773 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 OAZ1P54368 228 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 FOXA1P55317 472 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 STX5Q13190 355 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms