RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 LINC00523Q86TU6 105 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ZNF598Q86UK7 904 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 LRRC49Q8IUZ0 686 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PHYKPLQ8IUZ5 450 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ERI1Q8IV48 349 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 KLHL23Q8NBE8 558 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 B3GALNT2Q8NCR0 500 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 B4GALNT2Q8NHY0 566 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 TSPEARQ8WU66 669 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 SREK1Q8WXA9 508 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 TFAP2CQ92754 450 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 RCN3Q96D15 328 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ZNF419Q96HQ0 510 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 HIC2Q96JB3 615 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ZNF668Q96K58 619 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 CNDP2Q96KP4 475 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 LRGUKQ96M69 825 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ZNF560Q96MR9 790 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PPP1R2P1Q96PQ5 205 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 PPP1R10Q96QC0 940 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 GCNAQ96QF7 691 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CDCA3Q99618 268 aaPredicted RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 PKMYT1Q99640 499 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 MRPL57Q9BQC6 102 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 TRMOQ9BU70 441 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 EIF2AQ9BY44 585 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 MRPL9Q9BYD2 267 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 MRPL46Q9H2W6 279 aaKnown RBP6.89□□□□□ -1.31
UBR4-212ENST00000475973 WDR41Q9HAD4 459 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 C8orf4Q9NR00 106 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 TLR9Q9NR96 1032 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CHRAC1Q9NRG0 131 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 TMEM45AQ9NWC5 275 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ARHGEF38Q9NXL2 777 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CACNA2D2Q9NY47 1150 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 CLIC5Q9NZA1 410 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 ZNF639Q9UID6 485 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 HRH3Q9Y5N1 445 aa6.89□□□□□ -1.31
UBR4-212ENST00000475973 SPTBN5Q9NRC6 3674 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 A0A087X1B8 175 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 A0A1W2PRU2 124 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 AQP12BA6NM10 295 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 M0QYT0 321 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 EEF2KO00418 725 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 CDK2AP1O14519 115 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 PTGESO14684 152 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 XPOTO43592 962 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 MAFKO60675 156 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 ZMPSTE24O75844 475 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 RECQL4O94761 1208 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 VAPBO95292 243 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 H6PDO95479 791 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 IL2RAP01589 272 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 ITGB1P05556 798 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 FAM58BPP0C7Q3 252 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 LCP1P13796 627 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 HSD17B1P14061 328 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 PTPN1P18031 435 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 NFKB1P19838 968 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 PCSK6P29122 969 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 EPHA3P29320 983 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 GATMP50440 423 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 NUDT2P50583 147 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 NAGLUP54802 743 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 LILRA4P59901 499 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 RAB10P61026 200 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 PSME3P61289 254 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 MRPS22P82650 360 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 HPCAP84074 193 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 POU4F1Q01851 419 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 ADIGQ0VDE8 80 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 HYAL1Q12794 435 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 GRSF1Q12849 480 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBR4-212ENST00000475973 GRIK2Q13002 908 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 STX5Q13190 355 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 MAP7Q14244 749 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 SQLEQ14534 574 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 SV2CQ496J9 727 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 TMEM198Q66K66 360 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 NAPEPLDQ6IQ20 393 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 KLC3Q6P597 504 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 NOTUMQ6P988 496 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 CNSTQ6PJW8 725 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 KDELC1Q6UW63 502 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 RBM44Q6ZP01 1051 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 SPRED1Q7Z699 444 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 RTN4RL1Q86UN2 441 aaPredicted RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 FUNDC1Q8IVP5 155 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 CEP97Q8IW35 865 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 ADHFE1Q8IWW8 467 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 AQP12AQ8IXF9 295 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 KDF1Q8NAX2 398 aaPredicted RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 TXNDC5Q8NBS9 432 aaKnown RBP6.88□□□□□ -1.31
UBR4-212ENST00000475973 OR6B3Q8NGW1 331 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
UBR4-212ENST00000475973 PEX13Q92968 403 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms