RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 GRM3Q14832 879 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 MFSD13AQ14CX5 517 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TAF5Q15542 800 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TARBP2Q15633 366 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 NAB2Q15742 525 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SLC15A2Q16348 729 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ECM1Q16610 540 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 QPCTQ16769 361 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ZNF827Q17R98 1081 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 GPAT3Q53EU6 434 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 PAGE2BQ5JRK9 111 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TOR2AQ5JU69 321 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CDKL4Q5MAI5 379 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ERMARDQ5T6L9 678 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 FAM160B1Q5W0V3 765 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ATG16L1Q676U5 607 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CYB5RLQ6IPT4 315 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SLC16A12Q6ZSM3 486 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 EFL1Q7Z2Z2 1120 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 KRT25Q7Z3Z0 450 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SZRD1Q7Z422 152 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 FRMD5Q7Z6J6 570 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 LRRTM4Q86VH4 590 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ZNF410Q86VK4 478 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TPH2Q8IWU9 490 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SEPT12Q8IYM1 358 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 GRAMD1CQ8IYS0 662 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 THEM5Q8N1Q8 247 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 IL17RCQ8NAC3 791 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SLC17A8Q8NDX2 589 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CMASQ8NFW8 434 aaPredicted RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 OR2L3Q8NG85 312 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 OR5H6Q8NGV6 325 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ZNF420Q8TAQ5 688 aaPredicted RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 FAM172AQ8WUF8 416 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 RIN2Q8WYP3 895 aaPredicted RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 RFFLQ8WZ73 363 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 OR1E3Q8WZA6 343 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ESR2Q92731 530 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TMEM143Q96AN5 459 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TESCQ96BS2 214 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 REPS1Q96D71 796 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 C18orf8Q96DM3 657 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CALML4Q96GE6 196 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 MASTLQ96GX5 879 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 FUBP3Q96I24 572 aaKnown RBP eCLIP3.86□□□□□ -1.79
LSM2-211ENST00000475835 LURAP1Q96LR2 239 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 PPP1R2P1Q96PQ5 205 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 QKIQ96PU8 341 aaKnown RBP eCLIP3.86□□□□□ -1.79
LSM2-211ENST00000475835 OR1F2PQ96R84 312 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 NACC1Q96RE7 527 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SMAD5Q99717 465 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 PELOQ9BRX2 385 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 CDADC1Q9BWV3 514 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CEP41Q9BYV8 373 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 HSD3B7Q9H2F3 369 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 MTIF3Q9H2K0 278 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 MMP27Q9H306 513 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 OR51M1Q9H341 326 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 GOLPH3Q9H4A6 298 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ASB8Q9H765 288 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 COG4Q9H9E3 785 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 COPS7BQ9H9Q2 264 aaPredicted RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 ZMAT3Q9HA38 289 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 TMEM8AQ9HCN3 771 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 BRD7Q9NPI1 651 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ASCL3Q9NQ33 180 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 BMP2KQ9NSY1 1161 aaPredicted RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 ECHDC1Q9NTX5 307 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 DNAJC11Q9NVH1 559 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 BABAM1Q9NWV8 329 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 B3GNT2Q9NY97 397 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 COA4Q9NYJ1 87 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 NINJ2Q9NZG7 142 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 WHRNQ9P202 907 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ZSWIM5Q9P217 1185 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 ABCD2Q9UBJ2 740 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CACNG4Q9UBN1 327 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 AASSQ9UDR5 926 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 APOBEC3BQ9UH17 382 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 BTNL2Q9UIR0 455 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 APPL1Q9UKG1 709 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 LRFN2Q9ULH4 789 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 MINPP1Q9UNW1 487 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 AP4E1Q9UPM8 1137 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 PLCL2Q9UPR0 1127 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 RBMX2Q9Y388 322 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 MSRB2Q9Y3D2 182 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TESMINQ9Y4I5 508 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 CLDN16Q9Y5I7 305 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 SRPRBQ9Y5M8 271 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 RBM8AQ9Y5S9 174 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 PUS1Q9Y606 427 aaKnown RBP eCLIP3.86□□□□□ -1.79
LSM2-211ENST00000475835 ZHX2Q9Y6X8 837 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 UBE4BO95155 1302 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 TNKSO95271 1327 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 WDR17Q8IZU2 1322 aa3.86□□□□□ -1.79
LSM2-211ENST00000475835 USP42Q9H9J4 1324 aaKnown RBP3.86□□□□□ -1.79
LSM2-211ENST00000475835 FER1L4A9Z1Z3 1794 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms